Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_000913	2,980,730	Δ3 bp	intergenic (‑95/+32)	ygeA ← / ← araE	amino acid racemase/arabinose:H(+) symporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2980729	NA (NA)	19 (0.310)	16/388	2.3	NA	intergenic (‑94/+35)	ygeA/araE	amino acid racemase/arabinose:H(+) symporter
	?	NC_000913	2980733 =	NA (NA)					intergenic (‑98/+31)	ygeA/araE	amino acid racemase/arabinose:H(+) symporter

GCGCCCGCCCGCTGTAAGCCAA‑G‑CGCCGCCT‑CAGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGA  >  NC_000913/2980409‑2980999                                                                                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                         cgccccgcccgCTGCAAGCCAACGCCGCCGCCTCCAGCCAGAACTGTCCCCGGTTTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCCAGCTCATTCC‑TCCCCAGCAAACC‑AA‑‑‑TG‑TTTTCA‑TTCCTCTCTCCCTGATGTGTG‑TTACCGCAACAA‑GCT‑GAATAAGGAACGAGACAAAACGCCTCAAACGGCCAAAGT‑GCCCAATCTCTA‑TTAAACGAAAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATcgcccgt                                                                                                                                                                                                                                                               <  1:503173/357‑7 (MQ=255)                                    aGCCAGAA‑TGTCCCCGGTTTTTATCCCATTCCCCGCGACGCTGGCAACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑‑TG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTCAAACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCGGCCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACAT‑TTTTTGG‑TTTCCGGAATGAGCCAG‑aagt                                                                                                                                                  <  1:503178/422‑3 (MQ=255)                                                    agccaagcgccgcctcagccagaatgtccccggttttatcccattccccgcgacgctggcactcttctatttcatgaaaatcgacgctatgtagcagcacttgcgcagagtgaagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccaagctcattcctcccagcaaaccaatttgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaaagtgcccaatctctattaacgaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGt                                                                                                                                                                                      >  1:503181‑M2/310‑403 (MQ=255)                                                                        agccagaatgtccccggttttatcccattccccgcgacgctggcactcttctattcatgaaaatcgacgctatgtagcagcacttgcgcagagttgaagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaagaG‑CC‑GG‑ATGTACAGCACATCCGGCCCg                                                                                                                                                                                                                                                              >  1:503182‑M2/290‑315 (MQ=255)                                                                                       ttctATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAG‑‑‑‑‑‑‑‑‑‑G‑AG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACa                                                                                                                                                                                  >  1:503191/1‑342 (MQ=255)                                                                                       ttctATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑‑CCAGCTCATTCC‑T‑CCCAGCAAACCAAA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAG‑‑‑‑‑‑‑‑‑‑G‑AG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGc                                                                                                                                                                                        >  1:503192/1‑336 (MQ=255)                                                                                              tCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑gg                                                                                                                                                                                                                                                                                    >  1:1380409/1‑242 (MQ=255)                                                                                                      ccccgcgacgctggcactcttctatttcatgaaaatcgacgctatgtagcagcacttgcgcagagtgaagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataggaacgagacaaacgcctcaacggccaagtgcccaatctctattacgaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAG‑CGCCGATA‑TTTCTCAAC‑TCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACa                                                                                                                                                                                  >  1:503188‑M2/260‑355 (MQ=255)                                                                                                                          tatttcatgaaaatcgacgctatgtagcagcacttgcgcagagtgaagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaagG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑ttt                                                                                                                                                                                                                                       >  1:1380407‑M2/240‑286 (MQ=255)                                                                                                                           tttcatgaaaatcgacgctatgtagcagcacttgcgcagagtgaagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACa                                                                                                                                                                                  >  1:503193‑M2/239‑336 (MQ=255)                                                                                                                                                aaGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑tt                                                                                                                                                                      >  1:1380416/1‑294 (MQ=255)                                                                                                                                                            tAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑tt                                                                                                                                                                                                      >  1:1380417/1‑253 (MQ=255)                                                                                                                                                               tgcgcagagtgaagcccaccaagccgctgtttaatgccttcatttatcaaacgtagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaaG‑CC‑GG‑ATGTACAGCACATCGGCCCCGT‑GAAATCAGACGCCGATATTTTCTCAACTTCTCGCCTGCC‑TCAG‑‑TTGCGTTTCGATATGTTCCAGCGt                                                                                                                                                                                      >  1:1380413‑M2/203‑296 (MQ=255)                                                                                                                                                                     aagcccaccaagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaaagtgcccaatctctattaacgaaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑a                                                                                                                                                     >  1:503196‑M2/197‑319 (MQ=255)                                                                                                                                                                      aTTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGAc                                                                                                                                                                                   >  1:1380418/1‑262 (MQ=255)                                                                                                                                                                      aTTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACa                                                                                                                                                                                  >  1:1380419/1‑263 (MQ=255)                                                                                                                                                                              aagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTa                                                                                                                                                >  1:503199‑M2/188‑315 (MQ=255)                                                                                                                                                                              aaCGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑‑TTGCG‑TTCGATATGTTCCAGCGTGa                                                                                                                                                                                    >  1:1380421/1‑252 (MQ=255)                                                                                                                                                                               caagccgctgtttaatgccttcatttatcaaacgtagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTc                                                                                                                                                                                            >  1:503198‑M2/187‑275 (MQ=255)                                                                                                                                                                                  aagccgctgtttaatgccttcatttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgtttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaaG‑CC‑GG‑ATGTACAGCACAT‑CGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑tt                                                                                                                                                                      >  1:1380415‑M2/184‑290 (MQ=255)                                                                                                                                                                                   gttttaaatgccttcattttatcaaacgatagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagaacaaacgcctcaacggccaagtgccccaatctctattaacgaaagagG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACAT‑TTTTTGG‑TTTCCGGAATGAGCCAG‑‑AAGTAATGCCCAC‑‑AACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAgcgc                                                                                      >  1:503201‑M2/183‑364 (MQ=255)                                                                                                                                                                                               gtggATT‑CCCAGCTCATTCCTT‑CCCAGCAAACC‑AAATTTGTTTTTCATTTCCTCTCT‑CCTGATGTGTGTTTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTATTT‑AACG‑AAAAAAAAAAAAAAAGGAGG‑CCGGG‑ATGTACAGCACATCCGGCCCGTCGAAATCAGACGCCGATATTTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGGTTTTCCGGAATGAGCCAGAAAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTag                                                                                                            >  1:503203/1‑326 (MQ=255)                                                                                                                                                                                                       catttatcaaacgtagtaaggaatggtggattcccagctcattcctcccagcaaaccaattgtttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataggaacgagacaacgcctcaacggccaagtgcccaatctctattaacgaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATg                                                                                                                                                             >  1:503202‑M2/163‑278 (MQ=255)                                                                                                                                                                                                            aacgatagtaaggaatggtggattcccagctcattcctcccagcaaaaccaattgttttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaagG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGa                                                                                                                                                                                    >  1:1380422‑M2/158‑253 (MQ=255)                                                                                                                                                                                                                  cc‑t‑ccCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAG‑‑‑‑‑‑‑‑‑‑A‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑Caa                                                                                                                              >  1:503206/1‑267 (MQ=255)                                                                                                                                                                                                                  cc‑t‑ccCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACAt                                                                                                                                                                                                                                                                      >  1:1380424/1‑140 (MQ=255)                                                                                                                                                                                                                                         g‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCa                                                                                          >  1:1380426/1‑285 (MQ=255)                                                                                                                                                                                                                                               cA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGACAAAACGCCTC‑AA‑GGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑GCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACAT‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAG‑AATGCCCACAAAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGAAAg                                                            <  1:503205/308‑1 (MQ=255)                                                                                                                                                                                                                                                a‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACGAAAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTAcc                                                                                              <  1:1380423/271‑1 (MQ=255)                                                                                                                                                                                                                                                  ttCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGACAAAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACAT‑CGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGa  <  1:503207/365‑1 (MQ=255)                                                                                                                                                                                                                                                  cctcccagcaaaccaattgtttcattcctctctcctgatgtgtgttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaaG‑GC‑GG‑ATGTACAGCAC‑TC‑‑GCCCGT‑G‑AATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TT‑‑CG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑‑TTCCGGAATGAGCCAG‑AAAGTAATGc                                                                                                                                            >  1:1380425‑M2/120‑244 (MQ=255)                                                                                                                                                                                                                                                                        ttACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TTAAACG‑AAAAAAAG‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCGGCCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTtctc                                                                                                                                                                                                                            <  1:503208/139‑1 (MQ=255)                                                                                                                                                                                                                                                                            cGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAGAA‑‑‑‑‑‑‑‑‑‑G‑GC‑CG‑GG‑ATGTACAGCACATCCGGCCCGTCGAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACGCCAATGTTCAAGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGAt                                                 >  1:503210/1‑297 (MQ=255)                                                                                                                                                                                                                                                                                acaaGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GGTATGTACAGCACATCCGGCCCGT‑GAAATCacg                                                                                                                                                                                                                                                   >  1:1380429/1‑104 (MQ=255)                                                                                                                                                                                                                                                                                 caaGGCTAGAATAAGGAACGAGACAAAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACGAAAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑CCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑‑TTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAgg                                                               <  1:1380427/274‑1 (MQ=255)                                                                                                                                                                                                                                                                                            tAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCgg                                                                                                                                                                 >  1:1380437/1‑171 (MQ=255)                                                                                                                                                                                                                                                                                              ttaccgcaacaaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑‑TTGCG‑TTCGATATGTTCCAGCGTGACAATTTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATa                                                >  1:1380428‑M2/76‑297 (MQ=255)                                                                                                                                                                                                                                                                                                        aaggctgaataaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaaaG‑GC‑‑G‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑‑TTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACAcc                                 >  1:1380431‑M2/66‑299 (MQ=255)                                                                                                                                                                                                                                                                                                           aaCGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCACAAAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGAt                                                 <  1:1380434/262‑1 (MQ=255)                                                                                                                                                                                                                                                                                                            aCGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑‑AAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGt                                                                                                                                                                                      >  1:1380441/1‑137 (MQ=255)                                                                                                                                                                                                                                                                                                                 taaggaacgagacaaacgcctcaacggccaagtgcccaatctctattaacgaaaagGACC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGTGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAAt                                                                                  >  1:1380438‑M2/57‑245 (MQ=255)                                                                                                                                                                                                                                                                                                                     aCGGCA‑AAGT‑GCCCAATCTCTA‑‑T‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑ttttttg                                                                                                                                                                         <  1:1380435/136‑3 (MQ=255)                                                                                                                                                                                                                                                                                                                      cGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑a                                                                                                                                                     <  1:1380436/154‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                       ggCC‑AAGTCGCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACAT‑CGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCgg                                                                                                                                                                 <  1:503211/146‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                          c‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑‑AAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCgt                         <  1:1380440/270‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                  ctcaacggccaagtgcccaatctctattaacgaaaaggaG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGcc                                                                                                                                           >  1:503212‑M2/40‑172 (MQ=255)                                                                                                                                                                                                                                                                                                                                         ggccaagtgcccaatctctattaacgaggcgaG‑GC‑TG‑GTG‑ACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACAT‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑‑AACG‑CAATGtt                                                                                                                          >  1:503213‑M2/33‑179 (MQ=255)                                                                                                                                                                                                                                                                                                                                                      aaaaaa‑‑‑‑‑‑‑‑‑‑G‑GG‑‑C‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCata                                          >  1:1380444/1‑235 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                         g‑CC‑GG‑ATGTACAGCACAT‑CGG‑CCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGa                                                  <  1:1380442/217‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                         GCGCCCGCCCGCTGTAAGCCAA‑G‑CGCCGCCT‑CAGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAGCTCATTCC‑T‑CCCAGCAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCAATCTCTA‑TT‑AACG‑AAAAAA‑‑‑‑‑‑‑‑‑‑G‑GG‑CC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCG‑TTCGATATGTTCCAGCGTGACA‑‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGA  >  NC_000913/2980409‑2980999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.