| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1821865 | 14 (0.310) | 17 (0.370) | 16/374 | 2.0 | 54.0% | intergenic (‑246/+53) | chbB/osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE |
| ? | NC_000913 | 1821869 = | 15 (0.330) | intergenic (‑250/+49) | chbB/osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE | |||||
GCGCGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGATAAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑‑‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑AAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1821546‑1821865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑C‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCGCAA‑TTTGTGCAACCTGCGCCCGGCTCATGCCTTTTTTGA > NC_000913/1821869‑1822141 GCGCGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGATAAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑‑‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTG‑TTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTTCGGGGCAAATAATTCGCGAAGCATAATTAAGAACTCAGGCC‑AAAAAAC‑GGCGCAATGGCCGG‑TTTC > 1:579059/1‑341 AGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACT‑‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTG > 1:579076/1‑263 AACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACTTTTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑‑TTCCG‑TTGTTACTCAAGC‑‑TTCAGACGAATTGATTACT > 1:579078/1‑251 TGAC‑‑‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTC‑GACG‑CAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCC < 1:131109/217‑1 tgacTTTTTTGTGGCTG‑AAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCA‑GCC‑‑AAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCC < 1:131108/210‑1 AAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑‑AAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑‑TTCAGACGAATTGAT > 1:131110/1‑186 TACGGTATAGACCTGAGCAATAGTA‑TTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑AAAAAACAGGCGCAATGGCCGG‑TTTCCGATTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTA > 1:131113/1‑259 AGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATC > 1:579088/1‑274 ATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGAC‑AAGTAGG‑TTCTGC‑TTACCATCACGT > 1:579090/1‑253 TAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑AAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATT‑CTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AA > 1:968369/1‑313 TCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑AAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCA > 1:131116/1‑165 GACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCT > 1:579091/1‑203 TCACA‑TTTCGGGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCGCAA‑TTTGTGCAACCTGCGCC > 1:579092/1‑308 TC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCGCAATTTTGTGCAACCTGCGCCCG > 1:131118/1‑304 AATTAAGAACTCAGGCCAAAAAAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACGAAAGGTTTACCCGCAATTTTGTGCAACCTGCGCCCGGCTCATGCCTTTTTTGA > 1:131119/1‑299 CAGGCCAAAAAAAC‑GGCGCAATGGCCGGTTTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTACTCATCTAACAGCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGCAAACTACCGCGAGTCATGGATCATG > 1:579097/1‑227 AAAC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGCTTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTTGATAACCGGAGTTGATGACATGTCCGGTA‑TCATC > 1:579100/1‑132 GCGCGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGATAAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑‑‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACA‑TTTC‑GGGCAAATAATTCGCGAAG‑ATAATTAAGAACTCAGGCC‑AAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1821546‑1821865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑C‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAGC‑TTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTC‑TGATAACCGGAGTTGATGACATGTCCGGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCGCAA‑TTTGTGCAACCTGCGCCCGGCTCATGCCTTTTTTGA > NC_000913/1821869‑1822141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |