New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1821865	14 (0.310)	17 (0.370)	16/374	2.0	54.0%	intergenic (‑246/+53)	chbB/osmE	N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE
	?	NC_000913	1821869 =	15 (0.330)					intergenic (‑250/+49)	chbB/osmE	N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE

TTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGATAAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCT‑GGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTA‑CCCGCAA‑TTTGTGCAACCTG‑CG‑CCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAA  >  NC_000913/1821554‑1822165                                                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                              gcgcgcatttttgataccagtaaagaggtagacatgcccgcagaacaaaacagataaatgtgtttcttttccataaaactgccctcatcgacgattatctgtcagccagacactccgcaagccttaacctgcttccatgctctgggtaacttgcgaaaccaacatgactttttttgtggctgaaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgttctccttgacctgtggttatgaccctcttcacattttcggggcaaataattcgcgaagcataattaagaactcaggccaaaaaaC‑GGCGCAATGGCCGG‑TTTc                                                                                                                                                                                                                                                                                                           >  1:579059‑M2/323‑341 (MQ=255)                                                                                                            agacactccgcaagccttaacctgcttccatgctctgggtaacttgcgaaaccaacatgacttttttttgtggctgaaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTg                                                                                                                                                                                                                                                                          >  1:579076‑M2/216‑263 (MQ=255)                                                                                                                            aacctgcttccatgctctgggtaacttgcgaaaccaacatgacttttttttttgtggctgaaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑‑TTCCG‑TTGTTACTC‑AAGC‑‑TTCA‑GACGAATTGA‑TTACt                                                                                                                                                                                                                                                                   >  1:579078‑M2/200‑251 (MQ=255)                                                                                                                                   gCTCTGGGGTAACTTGCGAAACCAACATGACTTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTG‑ACCTTATAAATTG‑‑TTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTCGGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑‑AAAAAAACC‑GGCGCAATGGCCGG‑‑TTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCCGGGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATCACGTTGA‑CCCAGGATGTA‑GTCTGGc                                                                                                                        >  1:579079/1‑370 (MQ=255)                                                                                                                                   gCTCTGGGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTG‑ACCTTATAAATTG‑‑TTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTCG‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑Ggcgc                                                                                                                                                                                                                                                                                                                         >  1:579080/1‑191 (MQ=255)                                                                                                                                                                        tgactttttttgtggctgaaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcgacgcaaaacC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGcc                                                                                                                                                                                                                                                           <  1:131109‑M2/62‑1 (MQ=255)                                                                                                                                                                           tgacttttttgtggctgaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcagccaaaacC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGcc                                                                                                                                                                                                                                                           <  1:131108‑M2/62‑1 (MQ=255)                                                                                                                                                                                         ataCGGTATAGACCTGAGCAATAGTATTTCTTTG‑ACCTTAT‑AATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑‑AAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATc                                                                                                                                                                                                                                                   <  1:579081/201‑1 (MQ=255)                                                                                                                                                                                          aaaggagtatacggtatagacctgagcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑‑TTCA‑GACGAATTGA‑t                                                                                                                                                                                                                                                                       >  1:131110‑M2/138‑186 (MQ=255)                                                                                                                                                                                                   tacggtatagacctgagcaatagtattctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaCAGGCGCAATGGCCGG‑TTTCCGATTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTa                                                                                                                                                                                   >  1:131113‑M2/129‑259 (MQ=255)                                                                                                                                                                                                        gAGCAATAGTATTTCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTCGGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑‑AAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGc                                                                                                                                                                                                                                                                                          >  1:579087/1‑152 (MQ=255)                                                                                                                                                                                                               aGTATTTCTTTGTACCTTATAAATTGATTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAAAAAAAAACC‑Ggcgc                                                                                                                                                                                                                                                                                                                         <  1:579083/120‑1 (MQ=255)                                                                                                                                                                                                                gTATTTCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTtgatga                                                                                                                                                                                                       <  1:579084/221‑1 (MQ=255)                                                                                                                                                                                                                agcaatagtatttctttgaccttataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATc                                                                                                                                                   >  1:579088‑M2/116‑274 (MQ=255)                                                                                                                                                                                                                   tttCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGACCCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑‑AAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGca                                                                                                                                                                                                                                  <  1:579086/193‑1 (MQ=255)                                                                                                                                                                                                                   tttCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGca                                                                                                                                                                                                                                  <  1:579085/193‑1 (MQ=255)                                                                                                                                                                                                                                       ataaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGAC‑AAGTAGG‑TTCTGC‑TTACCATCACGt                                                                                                                                               >  1:579090‑M2/93‑253 (MQ=255)                                                                                                                                                                                                                                        g‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCtgtg                                                                                                                                                                                                                                                       <  1:131114/153‑1 (MQ=255)                                                                                                                                                                                                                                         taaattgtttctccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TT‑CTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑aa                                                                               >  1:968369‑M2/91‑313 (MQ=255)                                                                                                                                                                                                                                                    tccttgacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGca                                                                                                                                                                                                                                  >  1:131116‑M2/80‑165 (MQ=255)                                                                                                                                                                                                                                                    aCCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTa                                                                                                                                                                                                                                         <  1:131115/155‑1 (MQ=255)                                                                                                                                                                                                                                                        gacctgtggttatgaccctcttcacatttcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCt                                                                                                                                                                                    >  1:579091‑M2/76‑203 (MQ=255)                                                                                                                                                                                                                                                                            tcacatttcggggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTA‑CCCGCAA‑TTTGTGCAACCTG‑CG‑cc                                             >  1:579092‑M2/56‑308 (MQ=255)                                                                                                                                                                                                                                                                                    tcgggcaaataattcgcgaagataattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTA‑CCCGCAATTTTGTGCAACCTG‑CG‑CCCg                                           >  1:131118‑M2/48‑304 (MQ=255)                                                                                                                                                                                                                                                                                          taatTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACaag                                                                                                                                                                        <  1:579093/179‑2 (MQ=255)                                                                                                                                                                                                                                                                                                           aattaagaactcaggccaaaaaaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACGAAAGGTTTA‑CCCGCAATTTTGTGCAACCTG‑CG‑CCCGGCTCATGCCTTTTTTGa                          >  1:131119‑M2/25‑299 (MQ=255)                                                                                                                                                                                                                                                                                                             aGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTtgatga                                                                                                                                                                                                       <  1:1018028/132‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                      caggccaaaaaaaC‑GGCGCAATGGCCGGTTTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTACTCATCTAACAGCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGCAAACTACCGCGAGTCATGGATCATg                                                                                               >  1:579097‑M2/14‑227 (MQ=255)                                                                                                                                                                                                                                                                                                                         aggccaaaaCC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACG‑ATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCCGCAA‑TTTGTGCAACCTG‑CG‑CCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACaa  <  1:579095/303‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                            aaaaaaCC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTCAAAGC‑TTTCATGACGAATTGATTTACTTCGCAGCCTGTGGATCAAGTGTCGTATTCAGCACAGGTC‑TAGATAACCGGAGTtgaatga                                                                                                                                                                                                      <  1:579098/124‑5 (MQ=255)                                                                                                                                                                                                                                                                                                                                aaaC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGCTTTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTCTT‑GATAACCGGAGTTGATGACATGTCC‑GGTa‑tcatc                                                                                                                                                                                     >  1:579100‑M2/4‑132 (MQ=255)                                                                                                                                                                                                                                                                                                                                aaCC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGACCCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTACCCCGCAA‑TTTGTGCAACCTG‑CGCCCCGGCTCATGCCTTTTTTGACGTCttt                   <  1:579096/286‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                   c‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGG‑TTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTA‑CCCGCAA‑TTTGTGCAACCTGTCG‑CCCgg                                          >  1:579102/1‑257 (MQ=255)                                                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                              TTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGATAAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCT‑GGGTAACTTGCGAAACCAACATGAC‑TTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTG‑ACCTTATAAATTG‑TTTCTCCTTGACCTGTGGTTATGA‑CCCTCTTCACATTTC‑GGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑AAAAAAAACC‑GGCGCAATGGCCGG‑TTTCCG‑TTGTTACTC‑AAGC‑TTTCA‑GACGAATTGA‑TTACTTCGCAGCCTGTGGATC‑AGTGTCGTATTCAGCACAGGTC‑T‑GATAACCGGAGTTGATGACATGTCC‑GGTA‑TCATCTAAC‑GCGACAAAGTAGGTTTCTGCTTTACCATCACGTTGA‑CCCAGGATGTAGGTCTGGC‑AAGTACCGCGAG‑CATGGATCATGCTCACTTCAGACG‑AAGGTTTA‑CCCGCAA‑TTTGTGCAACCTG‑CG‑CCCGGCTCATGCCTTTTTTGACGTCTTTCACCACAGGCTGTACAA  >  NC_000913/1821554‑1822165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.