| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3427075 = | NA (NA) | 15 (0.330) | 14/374 | 2.4 | 40.5% | intergenic (‑42/+1) | alaU/ileU | tRNA‑Ala/tRNA‑Ile |
| ? | NC_000913 | 4037222 = | 22 (0.480) | intergenic (+5/‑38) | ileT/alaT | tRNA‑Ile/tRNA‑Ala | |||||
CAAAAGAAGTAGGTAGCTTAACCTTC‑GGGA‑GGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3427336‑3427075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAG‑TTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCG‑CAACACGATGATGAATCGAAAGAAACA > NC_000913/4037222‑4037504 CAAAAGAAGTAGGTAGCTTAACCTTCGGGGA‑GGGCGCTTACCAC‑TTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTAC‑TTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AATTGCACGGCAAA‑TTGAAGAGGTTTTAACTACATGTTATGGGGCTA > 1:367258/1‑307 AAAAGAAGTAGGTAGCTTAACCTTCGGGGAGGGGCGCTTACCAC‑TTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AATTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTT > 1:367259/1‑300 TACCAC‑TTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTAC‑TTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AATTGCACGGCAAATTTGAAGAGGTTTTAAC > 1:788103/1‑252 TGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCTACTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAA‑TGCACGGCAAATTTGAAGAGG > 1:1058642/1‑240 GATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATG‑AAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑TGCACGGCAAA‑TTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCAtgctg > 1:245346/1‑264 AGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AATTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCG‑CTGCTTTGCAGCGCAGGAGGTCTGCTGGTTCGATCCCGCATAGCCTCCACC‑T‑CTCTGTA > 1:15200/1‑310 ACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAA‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GCGTGGGAGAGCGCCTGC‑TTGCAGCGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCATCCTCTGT > 1:1034970/1‑240 CAGATTGTCTGATG‑AAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AATTGCACGG > 1:1130616/1‑122 CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAA‑TGCACGGCAAA‑TTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCATGCGTGGGAGAGCGCCTGCTTTGCAGCGCAGGAGGTCTGC‑GGTTCGATCCCGCAT > 1:1082109/1‑189 CAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTA > 1:15205/1‑103 CCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCAC > 1:286956/1‑214 AA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑TGCAC > 1:15208/1‑46 CCACTCAGGCCTACC‑AA‑TGCACGGCAAA‑TTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTTGCTCTTTAAAAATCTGGATCAAGCTG‑AAATT‑AAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGTCAACACGATGATGAATCGAAAGAAACA > 1:1252156/1‑299 AGGCCTACC‑AATTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTTGCTCTTTAAAAATCTGGA > 1:245338/1‑209 caAA‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAA > 1:990342/3‑140 CAAAAGAAGTAGGTAGCTTAACCTTC‑GGGA‑GGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAATGAGCAGTAAAACCT‑CTACAGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3427336‑3427075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCA‑GC‑TGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAG‑TTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCG‑CAACACGATGATGAATCGAAAGAAACA > NC_000913/4037222‑4037504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |