New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3427075 =	NA (NA)	15 (0.330)	14/374	2.4	40.5%	intergenic (‑42/+1)	alaU/ileU	tRNA‑Ala/tRNA‑Ile
	?	NC_000913	4037222 =	22 (0.480)					intergenic (+5/‑38)	ileT/alaT	tRNA‑Ile/tRNA‑Ala

GTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTC‑GGGA‑GGGCGCTTACC‑AC‑TTTGTGATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑TTTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAG‑TTTTGCT‑CTTTAAAAATCTGGATCAAGCTGAAAATTG‑AAACACTGAACAAC‑G‑AAAGTTGTTCGTGAGTCTCTCAAA‑TTTTCG‑CAACACGATGATGAATCGAAAGAAACA  >  NC_000913/4036949‑4037504                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                               gTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTC‑GGGA‑GGGCGCTTACCGAC‑TTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGCAAAA‑TTTGAAGAGGtttt                                                                                                                                                                                                                                                                                      <  1:863044/302‑1 (MQ=9)                           aaaagaagtaggtagcttaaccttcggggaggggcgcttaccacttgtgattcatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtactttgcagtgctcacacagattgtctgatgaaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataaggggtgaggtcggtggttcaagtccactcaggcctaccaatTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGtt                                                                                                                                                                                                                                                                           >  1:367259‑M2/265‑300 (MQ=255)                            caaaagaagtaggtagcttaaccttcggggagggcgcttaccacttgtgattcatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtacttgcagtgctcacacagattgtctgatgaaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataaggggtgaggtcggtggttcaagtccactcaggcctaccaatTGCACGGC‑AAA‑‑TTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑ta                                                                                                                                                                                                                                                                >  1:367258‑M2/264‑307 (MQ=255)                             aCCTTCGGGGAGGGGCGCTTACC‑AC‑TTTGTGATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAaga                                                                                                                                                                                                                                                                                            >  1:863050/1‑265 (MQ=12)                                                tACC‑ACTTTTGTGATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑‑TGCAC‑GC‑AAA‑TTTG‑AGAGGtttt                                                                                                                                                                                                                                                                                      >  1:1143260/1‑249 (MQ=11)                                                          tgtgATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAaga                                                                                                                                                                                                                                                                                            >  1:286945/1‑238 (MQ=17)                                                            tgATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTCTTTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑ggggag                                                                                                                                                                                                                                             >  1:863056/1‑275 (MQ=12)                                                               ttCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTTAAAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGc                                                                                                                                                                                                                                                                   <  1:863054/260‑1 (MQ=17)                                                                 cATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTCTTTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACt                                                                                                                                                                                                                                                                                  >  1:863057/1‑242 (MQ=17)                                                                   taccacttgtgattcatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtacttgcagtgctcacacagattgtctgatgaaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaatTGCACGGC‑AAA‑TTTGAAGAGGTTTTAAc                                                                                                                                                                                                                                                                                   >  1:788103‑M2/225‑252 (MQ=255)                                                                    gACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGT‑AAA‑TTTGAAGAGGtt                                                                                                                                                                                                                                                                                        <  1:863053/234‑1 (MQ=17)                                                                        tgtgattcatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtactttgcagtgctcacacagattgtctgatgaaaatgagcagtaaaacctactacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaaTGCACGGC‑AAA‑TTTGAAGAgg                                                                                                                                                                                                                                                                                          >  1:1058642‑M2/220‑240 (MQ=255)                                                                              gattcatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtactttgcagtgctcacacagattgtctgatgaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaTGCACGGC‑AAA‑‑TTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATagctcatgctg                                                                                                                                                                                                                                                    >  1:245346‑M2/214‑264 (MQ=255)                                                                                  cGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGGATGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGC‑AAt‑ttg                                                                                                                                                                                                                                                                                                 <  1:863058/213‑2 (MQ=11)                                                                                    tAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGC‑‑AA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCa                                                                                                                                                                                                                                                         <  1:1020478/246‑1 (MQ=17)                                                                                         a‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTTAAAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGCAAAA‑TTTGAAGAGGtttt                                                                                                                                                                                                                                                                                      <  1:863059/217‑1 (MQ=255)                                                                                                        gAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAATTTTGAAGAGGTTTTAACTACATGt                                                                                                                                                                                                                                                                            >  1:863060/1‑211 (MQ=255)                                                                                                        aggtaaccgtaggggaacctgcggttggatcacctccttaccttaaagaagcgtactttgcagtgctcacacagattgtctgatgaaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaatTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCG‑CTGCTTTGCAGCGCAGGAGGTCTGCTGGTTCGATCCCGCATAGCCTCCACC‑T‑CT‑CTGTa                                                                                                                                                                           >  1:15200‑M2/188‑310 (MQ=255)                                                                                                                     gATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑A‑CCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑TTTGCACGGCAAAA‑TTTGa                                                                                                                                                                                                                                                                                               <  1:286949/178‑1 (MQ=16)                                                                                                                             cc‑ttacctt‑aAAGAAGCGTTCTTTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGCTACCCCTGATAAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTTAATGGGGC‑TATAGCTCA‑GC‑T‑ggg                                                                                                                                                                                                                                                >  1:863061/1‑214 (MQ=11)                                                                                                                             cc‑ttacctt‑aAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACt                                                                                                                                                                                                                                                                                  >  1:286951/1‑182 (MQ=18)                                                                                                                                  acctt‑aAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑TGGGGAGAGCGCCTGC‑TTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTa                                                                                                                                                                           >  1:863063/1‑272 (MQ=255)                                                                                                                                  acctt‑aAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑TGGGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGc                                                                                                                                                                                                  >  1:863062/1‑252 (MQ=17)                                                                                                                                              gCGTTC‑TTTGAAGTGCTC‑ACACAGATTGTACTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAGCCTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑TTTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGtt                                                                                                                                <  1:286952/305‑1 (MQ=14)                                                                                                                                                  tC‑TTTGAAGTGCTCAACACAGATTGTACTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTCGAGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAAA‑TTTGCACGGC‑‑AA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGCGTATAGCTCA‑GC‑T‑GGGAGAgc                                                                                                                                                                                                                                           <  1:1126806/202‑1 (MQ=11)                                                                                                                                                   c‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AA‑‑‑TTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATggg                                                                                                                                                                                                                                                                     >  1:286953/1‑173 (MQ=14)                                                                                                                                                                              acagattgtctgatgaaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaaTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GCGT‑GGGAGAGCGCCTGC‑TTGCAGCGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCATCCT‑CTGt                                                                                                                                                                            >  1:1034970‑M2/118‑240 (MQ=255)                                                                                                                                                                                cagattgtctgatgaaatgagcagtaaaacctctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaatTGCACgg                                                                                                                                                                                                                                                                                                          >  1:1130616‑M2/116‑122 (MQ=255)                                                                                                                                                                                                                ctacaggcttgtagctcaggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaaTGCACGGC‑AAA‑‑TTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCATGCGT‑GGGAGAGCGCCTGCTTTGCAGCGCAGGAGGTCTGC‑GGTTCGATCCCGCAt                                                                                                                                                                                                >  1:1082109‑M2/84‑189 (MQ=255)                                                                                                                                                                                                                                 caggtggttagagcgcacccctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑a                                                                                                                                                                                                                                                                         >  1:15205‑M2/67‑103 (MQ=255)                                                                                                                                                                                                                                                    cctgataagggtgaggtcggtggttcaagtccactcaggcctaccaaTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCAc                                                                                                                             >  1:286956‑M2/48‑214 (MQ=255)                                                                                                                                                                                                                                                          aagggtgaggtcggtggttcaagtccactcaggcctaccaaTGCAc                                                                                                                                                                                                                                                                                                            >  1:15208‑M2/42‑46 (MQ=255)                                                                                                                                                                                                                                                                                  ccactcaggcctaccaaTGCACGGC‑AAA‑‑TTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTTGCT‑CTTTAAAAATCTGGATCAAGCTG‑AAATT‑‑AAACACTGAACAAC‑G‑AAAGTTGTTCGTGAGTCTCTCAAA‑TTTTCGTCAACACGATGATGAATCGAAAGAAACa  >  1:1252156‑M2/18‑299 (MQ=255)                                                                                                                                                                                                                                                                                       cTACC‑AAATTTTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑TGGGGAGAGCGCCTGC‑TTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAATAAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAG‑TTTTGCTACTTTAAAAATCTGGATCAAGCTGAAAATTGAAAACACTGAACAACTGAAAAGTTGTTCGTGAGTCTCTCAAATTTTTCG‑CAACACgaat                   >  1:863077/1‑281 (MQ=11)                                                                                                                                                                                                                                                                                       aggcctaccaatTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTTGCT‑CTTTAAAAATCTGGa                                                                                              >  1:245338‑M2/13‑209 (MQ=255)                                                                                                                                                                                                                                                                                            caaattttGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CTCCTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTgac                                                                                                                                      >  1:286958/6‑164 (MQ=0)                                                                                                                                                                                                                                                                                               caaaTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑aaaa                                                                                                                                                            >  1:990342‑M2/5‑140 (MQ=255)                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                               GTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTC‑GGGA‑GGGCGCTTACC‑AC‑TTTGTGATTCATGACTGGGGTGAAGTCGTAACAA‑GGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCC‑TTACCTT‑AAAGAAGCGTTC‑TTTGAAGTGCTC‑ACACAGATTGT‑CTGATGAAAATGAGCAGTAAAACCTCTACAGGCTTGTAG‑CTC‑AGG‑TGGTTAGAGCGC‑ACCCCTGATAA‑GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACC‑AAA‑TTTGCACGGC‑AAA‑TTTGAAGAGGTTTTAACTACATGTT‑ATGGGGC‑TATAGCTCA‑GC‑T‑GGGAGAGCGCCTGCTTTGCA‑CGCAGGAGGTCTGC‑GGTTCGATCCCGCATAG‑CTCCACCAT‑CT‑CTGTAGTGATTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAG‑TTTTGCT‑CTTTAAAAATCTGGATCAAGCTGAAAATTG‑AAACACTGAACAAC‑G‑AAAGTTGTTCGTGAGTCTCTCAAA‑TTTTCG‑CAACACGATGATGAATCGAAAGAAACA  >  NC_000913/4036949‑4037504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.