New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 657539	31 (0.680)	16 (0.350)	13/374	2.7	34.4%	intergenic (+38/+16)	cspE/crcB	transcription antiterminator and regulator of RNA stability/F(‑) channel
	?	NC_000913	657543 =	30 (0.660)					intergenic (+42/+12)	cspE/crcB	transcription antiterminator and regulator of RNA stability/F(‑) channel

TTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACACAGCATTTGTGTCTA‑TTTTTCATGTAAAGGTAA‑TTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTT‑AA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATG  >  NC_000913/657197‑657781                                                                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                      ttttAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACACAGCATTTGTGTCTATTTTTTCATGTAAAGGTAATTTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑CTTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGTAAAGA‑TACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGG‑t                                                                                                                                                                                                                                                                   >  1:1255889/1‑350 (MQ=255)                                                                                       ggTAA‑TTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTT‑AA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGTAAAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGGATTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                       >  1:435287/1‑328 (MQ=255)                                                                                             ttttGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTT‑AAGTGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGGCCCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑‑GG‑TTT‑TTTTTGG‑TC‑ttt                                                                                                                                                                                                                                                  <  1:435286/273‑1 (MQ=255)                                                                                                       tAAGATTAAAGGTAACGTTAAGTGGTTT‑AA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGTAAAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑TT‑TTTTTGG‑TCTTTTAG‑TGTGCGGTTTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAg                                                                                                                                                                                    >  1:435290/1‑316 (MQ=255)                                                                                                            ttAAAGGTAACGTTAAGTGGTTT‑AA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGT‑TTCAgacgaacaggctga                                                                                                                                                                                                                     >  1:52342/1‑268 (MQ=255)                                                                                                                          aaGTGGTTT‑AA‑TGAGTCCAAAGGGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATg                                                                                                                                                                                                           >  1:435291/1‑277 (MQ=255)                                                                                                                                             ccaa‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑‑AAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑GG‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                       <  1:52343/268‑1 (MQ=255)                                                                                                                                                      tCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAA‑‑CCGCTTAATCAGC‑Gtgtttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccag                                                                                                                                                                                            <  1:52344‑M1/272‑76 (MQ=255)                                                                                                                                                                       gAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Gtggttttttggtctttagtgtgcggttgaggccgaa                                                                                                                                                                                                                                   <  1:52345‑M1/218‑37 (MQ=255)                                                                                                                                                                                           agttCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGGCCCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagacccc                                                                                                                                                                                              <  1:435293‑M1/237‑74 (MQ=255)                                                                                                                                                                                                        ctctGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGTCGCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACt                                                                                                      >  1:435297/1‑294 (MQ=255)                                                                                                                                                                                                           tGCAATCCAGACTAATAGGTTTT‑AAAACTACTTGTAC‑TG‑AAGGTCAG‑CGCGTAGAGTTCG‑AAT‑CACTAACGGTGCC‑AAAGGCCCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtctttagtgtgcggt                                                                                                                                                                                                                                               <  1:435295‑M1/176‑25 (MQ=255)                                                                                                                                                                                                               aTCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TGAAAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑G‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCGAAAAAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aaaaa                                                                                                                                                                                    <  1:964399/214‑2 (MQ=255)                                                                                                                                                                                                                  cAGACTAAT‑GGTTTTAAAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑‑AACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑G‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aaa                                                                                                                                                                                      <  1:52346/203‑1 (MQ=255)                                                                                                                                                                                                                   aGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑TT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                       <  1:435296/206‑1 (MQ=255)                                                                                                                                                                                                                      cTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGa                                                                                              >  1:435299/1‑288 (MQ=255)                                                                                                                                                                                                                      cTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTTG‑GC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTc                                                                                                                                                        >  1:52347/1‑233 (MQ=255)                                                                                                                                                                                                                       tAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑G‑‑‑‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCGA‑‑AAAAC‑AGCCAGAATGcc                                                                                                                                                                                                         <  1:1091763/186‑1 (MQ=255)                                                                                                                                                                                                                         aT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAAACCGCTTAATCAGC‑GGGTTTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACG‑TCAGTAATG‑CCCAGCCAAAAGCGG‑CCCTCTTTGTAACAAAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAAt                                                            >  1:52348/1‑320 (MQ=255)                                                                                                                                                                                                                                   aaaaCT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGGTTTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTc                                                                                                                                                        >  1:1125700/1‑222 (MQ=255)                                                                                                                                                                                                                                    aaaCT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCG‑AAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑TT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑Ag                                                                                                                                                                                                                   <  1:435298/166‑1 (MQ=255)                                                                                                                                                                                                                                          ctTG‑‑C‑TGAAAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Gtgtttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaaagaccccagaaggttgacgaaaaacgttcagtaatgcccagccaa                                                                                                                                                       <  1:1062789‑M1/234‑113 (MQ=255)                                                                                                                                                                                                                                             g‑‑C‑TG‑AAGGTCAGACGCGTAGAGTTCGAAATACACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTTGTTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGtt                                                                                                                                                         <  1:1109768/215‑1 (MQ=255)                                                                                                                                                                                                                                                c‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGaa                                                                                  <  1:435300/278‑1 (MQ=255)                                                                                                                                                                                                                                                         tCAG‑CGCGTAGAGTTCG‑AAT‑CACTAACGGTGCCAAAAGGCCCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgccccagccaaagcggccctcttgtaacaaa                                                                                                                                    <  1:435302‑M1/241‑132 (MQ=255)                                                                                                                                                                                                                                                                     agTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Gagttttttggtcttt                                                                                                                                                                                                                                                        <  1:1069188‑M1/112‑16 (MQ=255)                                                                                                                                                                                                                                                                         cGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACg                                                                                                                                                           >  1:435304/1‑187 (MQ=255)                                                                                                                                                                                                                                                                                                        tCTGCTGC‑‑AACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Ggttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgccccagccaaagcggccctcttgtaacaaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggtgattaatactttcca                                                          <  1:435305‑M1/269‑206 (MQ=255)                                                                                                                                                                                                                                                                                                         ctgctgC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGTCGCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑‑CCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAAcaccac                                                                                                       >  1:435308/1‑206 (MQ=255)                                                                                                                                                                                                                                                                                                               c‑AAACGTAATCGCTCTGT‑AAGATTACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGGTTTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGGACCCTC‑TTGTa                                                                                                                     >  1:995993/1‑188 (MQ=255)                                                                                                                                                                                                                                                                                                                  aaCGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑TT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAg                                                                                                                                    <  1:435306/170‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                   aCGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAGAACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATAC‑TTCCACACTGGATCAATG‑TCGTCa                 >  1:435313/1‑283 (MQ=255)                                                                                                                                                                                                                                                                                                                     gTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑GG‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGCAAAAAG‑ACCCCAGAAGGTTGACGAAAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑aaa                                                                                                               <  1:52350/183‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                        aTCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATg  >  1:435315/1‑293 (MQ=255)                                                                                                                                                                                                                                                                                                                         tCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtcttt                                                                                                                                                                                                                                                         <  1:435307‑M1/64‑15 (MQ=255)                                                                                                                                                                                                                                                                                                                          cGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Ggttttttggtctttagtgtgcggttgaggcgaaaacagccagaatgccagtgcggtcatggcaaaagacccccagaaggttgacgaaaacgttcagtaatgccccagccaaagcggcccctcttgtaacaaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggtgattaatactttccacactggatcaatgttcgtcatcctgctgaaccatgcgaatcctattcctat      <  1:435309‑M1/305‑258 (MQ=255)                                                                                                                                                                                                                                                                                                                           gCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgccccagccaaagcggccctcttgtaacaaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggtgatt                                                                     <  1:435311‑M1/242‑195 (MQ=255)                                                                                                                                                                                                                                                                                                                            ctctGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGtttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgcccagccaaagcggcccctcttgtaacaaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggtgattaatactttcca                                                          <  1:435310‑M1/252‑206 (MQ=255)                                                                                                                                                                                                                                                                                                                             tctGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑TT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGtt                                                                                       <  1:435312/202‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                 t‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑Gtgtttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaaagaccccagaaggttgacgaaaaacgttcagtaatgcccagccaaagcggccctcttgtaacaaaaacaccacttctgccgaaaaatgttga                                                                                                        <  1:1257890‑M1/200‑160 (MQ=255)                                                                                                                                                                                                                                                                                                                                 t‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGGTTTT‑TTTTTGGTTC‑TTTAGTTGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCcaca                                                                >  1:1123508/1‑224 (MQ=255)                                                                                                                                                                                                                                                                                                                                         aCGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑AGG‑‑TT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAACTAGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACGAAAAACGTTCAGTAATGCCCCAGCC‑‑AAGCGG‑CCCTC‑TTGTAACAAAAAACACCACTTCTGCCGaa                                                                                             <  1:435314/188‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                             cAGCAAGAATTCAAAACCCGCTTAATCAGC‑Ggttttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgccccagccaaagcggcccctcttgtaacaaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggtgattaatactttccacactggatcaatgttcgtcatcctgctgaaccatgcgaatcctattccta       <  1:435316‑M1/287‑257 (MQ=255)                                                                                                                                                                                                                                                                                                                                                    aaTTCAAAACCCGCTTAATCAGC‑Gtggttttggtctttagtgtgcggttgaggccgaaaacagccagaatgccagtgcggtcatggcaaaagaccccagaaggttgacgaaaacgttcagtaatgcccagccaaagcggccctcttgtaacaaaacaccacttctgccgaaaatgttgagaaggttgttagaccgccacaaaatccggtggt                                                                           <  1:52351‑M1/212‑189 (MQ=255)                                                                                                                                                                                                                                                                                                                                                     aTTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATAC‑TTCCACACTGGATCAATGTTCg                    >  1:435317/1‑246 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                   tAATCAGC‑GGGTTTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACG‑TCAGTAATG‑CCCAGCC‑AAAGCGG‑CCct                                                                                                                            >  1:52354/1‑131 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                        aGC‑Gtgtttttggtctttagtgtgcggttgaggccgaaaaacagccagaatgccagtgcggtcatggcaaaaagaccccagaaggttgacgaaaaacgttcagtaatgcccagccaaagcggccctcttgtaacaaaaacaccacttctgccgaaaaatgttga                                                                                                       <  1:1050786‑M1/164‑161 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                      TTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACACAGCATTTGTGTCTA‑TTTTTCATGTAAAGGTAA‑TTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTT‑AA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAAT‑GGTTTT‑AAAACT‑CTTG‑‑C‑TG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TTT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATG  >  NC_000913/657197‑657781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.