New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 657539	31 (0.680)	16 (0.350)	13/374	2.7	34.4%	intergenic (+38/+16)	cspE/crcB	transcription antiterminator and regulator of RNA stability/F(‑) channel
	?	NC_000913	657543 =	30 (0.660)					intergenic (+42/+12)	cspE/crcB	transcription antiterminator and regulator of RNA stability/F(‑) channel

GGTAATTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATGCGAATCCTATTCCTAT  >  NC_000913/657282‑657797                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                     ggTAATTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGTAAAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGGATT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                                         >  1:435287/1‑328 (MQ=255)      ttttGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAAGTGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGGCCCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑‑GG‑TT‑‑T‑TTTTTGG‑TC‑ttt                                                                                                                                                                                                                                                                    <  1:435286/273‑1 (MQ=255)                tAAGATTAAAGGTAACGTTAAGTGGTTTAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGTAAAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑T‑‑T‑TTTTTGG‑TCTTTTAG‑TGTGCGGTTTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAg                                                                                                                                                                                                      >  1:435290/1‑316 (MQ=255)                     ttAAAGGTAACGTTAAGTGGTTTAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGT‑TTCAgacgaacaggctga                                                                                                                                                                                                                                       >  1:52342/1‑268 (MQ=255)                                   aaGTGGTTTAA‑TGAGTCCAAAGGGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATg                                                                                                                                                                                                                             >  1:435291/1‑277 (MQ=255)                                                     ccaa‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑‑AAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑GG‑‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                                         <  1:52343/268‑1 (MQ=255)                                                                               tcggtttcattactccggaagacggcagcaaagacgtgttcgtacacttctctgcaatccagactaatggttttaaaactcttgctgaaggtcagcgcgtagagttcgaaatcactaacggtgccaaaggcccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaccgcttaatcagcgT‑‑G‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAg                                                                                                                                                                                             <  1:52344‑M2/75‑1 (MQ=255)                                                                                              gaagacggcagcaaagacgtgttcgtacacttctctgcaatccagactaatggttttaaaactcttgctgaaggtcagcgcgtagagttcgaaatcactaacggtgccaaaggcccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcgTGGT‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑aa                                                                                                                                                                                                                                           <  1:52345‑M2/36‑1 (MQ=255)                                                                                                               agttcgtacacttctctgcaatccagactaatggttttaaaactcttgctgaaggtcagcgcgtagagttcgaaatcactaacggtgccaaaggccccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑cccc                                                                                                                                                                                               <  1:435293‑M2/73‑1 (MQ=255)                                                                                                                ctctGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGTCGCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACt                                                                                                                       >  1:435297/1‑294 (MQ=255)                                                                                                                       aTCCAGACTAATGGTTTT‑AAAACTCTTGCTGAAAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑G‑‑‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCGAAAAAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aaaaa                                                                                                                                                                                                      <  1:964399/214‑2 (MQ=255)                                                                                                                          cAGACTAATGGTTTTAAAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑‑AACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑G‑‑‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aaa                                                                                                                                                                                                        <  1:52346/203‑1 (MQ=255)                                                                                                                           aGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑T‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑aa                                                                                                                                                                                                         <  1:435296/206‑1 (MQ=255)                                                                                                                            tgcaatccagactaataggttttaaaactacttgtactgaaggtcagcgcgtagagttcgaatcactaacggtgccaaaggccccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑t                                                                                                                                                                                                                                                        <  1:435295‑M2/24‑1 (MQ=255)                                                                                                                              cTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑a                                                                                                              >  1:435299/1‑288 (MQ=255)                                                                                                                              cTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTTG‑GC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTc                                                                                                                                                                         >  1:52347/1‑233 (MQ=255)                                                                                                                               tAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑G‑‑‑‑‑‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCGA‑‑AAAAC‑AGCCAGAATGcc                                                                                                                                                                                                                           <  1:1091763/186‑1 (MQ=255)                                                                                                                                 aTGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAAACCGCTTAATCAGC‑GGGTTT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACG‑TCAGTAATG‑CCCAGCCAAAAGCGG‑CCCTCTTTGTAACAAAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAAt                                                                            >  1:52348/1‑320 (MQ=255)                                                                                                                                          aaaaCTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGGTTT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTc                                                                                                                                                                         >  1:1125700/1‑222 (MQ=255)                                                                                                                                           aaaCTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCG‑AAT‑CACTAACGGTGCCAAAAGG‑CCCTTCTGCTGCAAAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑T‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑Ag                                                                                                                                                                                                                                     <  1:435298/166‑1 (MQ=255)                                                                                                                                                   gCTG‑AAGGTCAGACGCGTAGAGTTCGAAATACACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑TGTTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGtt                                                                                                                                                                          <  1:1109768/215‑1 (MQ=255)                                                                                                                                                    cTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGaa                                                                                                  <  1:435300/278‑1 (MQ=255)                                                                                                                                                          cttgctgaaaggtcagcgcgtagagttcgaaatcactaacggtgccaaaaggcccttctgctgcaaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcgT‑‑G‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGCAAAAAG‑A‑CCCCAGAAGGTTGACGAAAAACGTTCAGTAATG‑CCCAGCC‑aa                                                                                                                                                       <  1:1062789‑M2/112‑1 (MQ=255)                                                                                                                                                                      tcagcgcgtagagttcgaatcactaacggtgccaaaaggccccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑aaa                                                                                                                                <  1:435302‑M2/131‑1 (MQ=255)                                                                                                                                                                            cGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACg                                                                                                                                                                            >  1:435304/1‑187 (MQ=255)                                                                                                                                                                                  agttcgaaatcactaacggtgccaaaggcccttctgctgcaaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcgaG‑‑T‑TTTTTGG‑TC‑ttt                                                                                                                                                                                                                                                                    <  1:1069188‑M2/14‑1 (MQ=255)                                                                                                                                                                                                            ctgctgC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGTCGCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑‑CCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAAcaccac                                                                                                                        >  1:435308/1‑206 (MQ=255)                                                                                                                                                                                                                  c‑AAACGTAATCGCTCTGT‑AAGATTACGTCAGCAAGAATTCAAAA‑CCGCTTAATCAGC‑GGGTTT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGGACCCTC‑TTGTa                                                                                                                                      >  1:995993/1‑188 (MQ=255)                                                                                                                                                                                                                    tctgctgcaacgtaatcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcgG‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCca                                                     <  1:435305‑M2/205‑1 (MQ=255)                                                                                                                                                                                                                     aaCGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑T‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAg                                                                                                                                                     <  1:435306/170‑1 (MQ=255)                                                                                                                                                                                                                      aCGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TCTTTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAGAA‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATAC‑TTCCACACTGGATCAATG‑TCGTCa                                 >  1:435313/1‑283 (MQ=255)                                                                                                                                                                                                                        gTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTC‑AAACCCGCTTAATCAGC‑GG‑‑‑‑‑‑‑‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGCAAAAAG‑A‑CCCCAGAAGGTTGACGAAAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑aaa                                                                                                                                <  1:52350/183‑1 (MQ=255)                                                                                                                                                                                                                           aTCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATg                  >  1:435315/1‑293 (MQ=255)                                                                                                                                                                                                                                tctGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑‑T‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGtt                                                                                                       <  1:435312/202‑1 (MQ=255)                                                                                                                                                                                                                                  tcgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑ttt                                                                                                                                                                                                                                                                    <  1:435307‑M2/14‑1 (MQ=255)                                                                                                                                                                                                                                    t‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGGTTT‑‑T‑TTTTTGGTTC‑TTTAGTTGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCcaca                                                                                >  1:1123508/1‑224 (MQ=255)                                                                                                                                                                                                                                    gctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGAtt                                                                <  1:435311‑M2/194‑1 (MQ=255)                                                                                                                                                                                                                                    cgctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcgG‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGG‑CG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑ACCCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGGCCCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATGCGAAtcctattcctat  <  1:435309‑M2/257‑1 (MQ=255)                                                                                                                                                                                                                                     ctctgtaagatacgtcagcaagaattcaaaacccgcttaatcagcggT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGGCCCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCca                                                     <  1:435310‑M2/205‑1 (MQ=255)                                                                                                                                                                                                                                           taagatacgtcagcaagaattcaaaacccgcttaatcagcgT‑‑G‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGCAAAAAG‑A‑CCCCAGAAGGTTGACGAAAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAAATGTTga                                                                                                     <  1:1257890‑M2/159‑1 (MQ=255)                                                                                                                                                                                                                                            aCGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑AGG‑‑T‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAACTAGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACGAAAAACGTTCAGTAATGCCCCAGCC‑‑AAGCGG‑CCCTC‑TTGTAACAAAAAACACCACTTCTGCCG‑aa                                                                                                             <  1:435314/188‑1 (MQ=255)                                                                                                                                                                                                                                                     cagcaagaattcaaaacccgcttaatcagcgG‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATGCCCCAGCC‑AAAGCGGCCCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATGCGAAtcctattccta   <  1:435316‑M2/256‑1 (MQ=255)                                                                                                                                                                                                                                                        aTTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATAC‑TTCCACACTGGATCAATGTTCg                                    >  1:435317/1‑246 (MQ=255)                                                                                                                                                                                                                                                            aattcaaaacccgcttaatcagcgT‑‑G‑GTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑‑AAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCggtggt                                                                    <  1:52351‑M2/188‑1 (MQ=255)                                                                                                                                                                                                                                                                      tAATCAGC‑GGGTTT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACG‑TCAGTAATG‑CCCAGCC‑AAAGCGG‑CCct                                                                                                                                             >  1:52354/1‑131 (MQ=255)                                                                                                                                                                                                                                                                                agcgT‑‑G‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCGA‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGCAAAAAG‑A‑CCCCAGAAGGTTGACGAAAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCGAAAAATGTTga                                                                                                     <  1:1050786‑M2/160‑1 (MQ=255)                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                     GGTAATTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAA‑TGAGTCCAAA‑GGATTCGGTTTCATTACTCCGGAAGACGGCAGC‑AAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTT‑AAAACTCTTGCTG‑AAGGTCAG‑CGCGTAGAGTTCGAAAT‑CACTAACGGTGCC‑AAAGG‑CCCTTCTGCTGC‑AAACGTAATCGCTCTGT‑AAGA‑TACGTCAGCAAGAATTCAAAACCCGCTTAATCAGC‑GGG‑TT‑‑T‑TTTTTGG‑TC‑TTTAG‑TGTGCGG‑TTGAGGCCG‑‑‑AAAAC‑AGCCAGAATGCCAGT‑GCGGTCATGGC‑AAAAG‑A‑CCCCAGAAGGTTGACG‑AAAACGTTCAGTAATG‑CCCAGCC‑AAAGCGG‑CCCTC‑TTGTAAC‑AAAAACACCACTTCTGCCG‑AAAATGTTGAGAAGGTTGTTAGACCGCCACAAAATCCGGTGGTGATTAATACTTTCCACACTGGATCAATGTTCGTCATCCTGCTGAACCATGCGAATCCTATTCCTAT  >  NC_000913/657282‑657797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.