New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	17 (0.370)	21 (0.510)	18/342	1.4	55.6%	coding (290/630 nt)	ycfK	e14 prophage; protein StfP
	?	NC_000913	1209619 =	18 (0.430)					pseudogene (37/537 nt)	stfE	e14 prophage; putative side tail fiber protein fragment

AATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTG‑AAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTTGTCGTGCTGGTGG  >  NC_000913/1209317‑1209916                                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                            aaTCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCTCGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTA‑TTGTCGGATAAGC‑‑‑TT‑CCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CATTTTCAGCCAGCCTGTTGGCGGAGTT‑GGCTGAAGGCCACGGAACCGGGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑‑TTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTAc                                                                                                                                                                                                                                                                     >  1:503091/1‑352 (MQ=255)                       gTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAGAAAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACCAAACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACC‑AC‑G‑TTTATGAAAATGAA‑G‑aaa                                                                                                                                                                                                                                                                                                      <  1:990957/301‑1 (MQ=255)                                                                                         gcgctgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatccccccagaggcagatgcttttgcggcattccaccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑‑TTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑g                                                                                                                                                                                                                                                                 >  1:89146‑M2/231‑283 (MQ=255)                                                                                                     gtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatccccccagaggcagatgctttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑‑AATGGCATCATTCCTGCTTTTACCA‑‑GGGGA‑TTTAAC‑ATGCTTATT‑GGCTatgtacgctgtat                                                                                                                                                                                                                         >  1:502914‑M2/219‑303 (MQ=255)                                                                                                                        acacaggcattattaaacgcaaccgggaatacaactgtatttccatccccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑Ag                                                                                                                                                                                                          <  1:89267‑M2/105‑1 (MQ=255)                                                                                                                                                 ggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTAcc                                                                                                                                                                                                                                                                    >  1:502912‑M2/175‑227 (MQ=255)                                                                                                                                                   cAGGCAATTTATTTGTCGGATAAGCCTTTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CATTTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACCGGGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑tta                                                                                                                                                                                                                                                        >  1:503116/1‑221 (MQ=255)                                                                                                                                                      caactgtattttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑‑GGGGA‑TTTAAC‑ATGCTTATTGGGCTATGTAc                                                                                                                                                                                                                                >  1:502916‑M2/170‑254 (MQ=255)                                                                                                                                                      acaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACg                                                                                                                                                                                        <  1:89270‑M2/122‑1 (MQ=255)                                                                                                                                                        aaTTTATTTGTCGGATAAGCC‑TTTGCCAGTTCCGGGTAATTCTTCAGCAG‑AAAAAGCGGGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAGAAGCCATTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTaa                                                                                                                                                                                                                                                      <  1:1179051/220‑1 (MQ=255)                                                                                                                                                            tatttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CATTTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑GTTTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGc                                                                                                                                                             >  1:1122843/1‑296 (MQ=255)                                                                                                                                                            tatttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑GTTTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGc                                                                                                                                                             >  1:1063769/1‑294 (MQ=255)                                                                                                                                                               ttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTGTCA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTCCGT‑CCCAAACCAAC‑G‑TTTATGAAAATGAAGG‑AAATAACAAGC‑a                                                                                                                                                                                                                                                                                            <  1:89256/177‑1 (MQ=255)                                                                                                                                                               ttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑TAGGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCt                                                                                                                                                                                                                                               <  1:503115/216‑1 (MQ=255)                                                                                                                                                               ttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAACAG‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCt                                                                                                                                                                                                                                               <  1:503113/216‑1 (MQ=255)                                                                                                                                                               ttGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAACAG‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCt                                                                                                                                                                                                                                               <  1:503114/216‑1 (MQ=255)                                                                                                                                                                                tGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑GTTTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑tt                                                                                                                                                                                                                                                         >  1:89258/1‑191 (MQ=255)                                                                                                                                                                                        ccGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACCGGGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑GTTTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAAt                                                                                                                                                                                    >  1:1158397/1‑247 (MQ=255)                                                                                                                                                                                                  cttcAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑TCCCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGCAAAATGGCATCATTCCTGCTTTTACCA‑GGGGGATTTTAACAATGCTTATT‑GGCTATGTACGCGTATCAACAAAATGACCAAGAACACAGATCT‑ACAACGt                                                                                                                                                                                       <  1:503121/240‑1 (MQ=255)                                                                                                                                                                                                              aaaGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACCGGGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGAt                                                                                                                                                               >  1:503122/1‑246 (MQ=255)                                                                                                                                                                                                                  atgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCAGGGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAACAAAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAAGGCCGGGACTG‑aaaa                                                                                               <  1:89268‑M2/208‑1 (MQ=255)                                                                                                                                                                                                                             g‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCC‑AACCAAC‑GTTTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTG‑aaaaa                                                                                              >  1:968527/1‑292 (MQ=255)                                                                                                                                                                                                                              tgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGc                                                                                                                                                         >  1:89145‑M2/98‑248 (MQ=255)                                                                                                                                                                                                                               cA‑TTTCAGCCAG‑CTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑‑TTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTG‑‑AAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTgg                                                   >  1:89262/1‑330 (MQ=255)                                                                                                                                                                                                                                  tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGAcc                                                                                                                                                                                                             <  1:503129‑M2/103‑1 (MQ=255)                                                                                                                                                                                                                                      accaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgtctcggcgatgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATgg                                                                                                                                                                                                                                                                                       >  1:502913‑M2/90‑123 (MQ=255)                                                                                                                                                                                                                                            aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATgaa‑g‑a                                                                                                                                                                                                                                                                                                        <  1:89139‑M2/18‑1 (MQ=255)                                                                                                                                                                                                                                                ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTAcg                                                                                                                                                                                                                               >  1:502915‑M2/80‑165 (MQ=255)                                                                                                                                                                                                                                                ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑‑TTTTGAAGACAAGATAAg                                                                                                                                 >  1:503125‑M2/80‑251 (MQ=255)                                                                                                                                                                                                                                                ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGAc                                                                                                                                                                                                              >  1:89144‑M2/80‑180 (MQ=255)                                                                                                                                                                                                                                                  aaccggtatagctatgaaaccgtgcgtcctaatgtagccgttgctgcattgagtttttgctccttctcccaaaccaaC‑G‑TTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑t                                                                                                                                                                                                                                                          >  1:1183275‑M2/78‑137 (MQ=255)                                                                                                                                                                                                                                                    cGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑aaaaggcc                                                                                                          <  1:89263/260‑6 (MQ=255)                                                                                                                                                                                                                                                      gtaatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGt                                                                                                                                                                                       <  1:985787‑M2/123‑1 (MQ=255)                                                                                                                                                                                                                                                       gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑‑AATAACAAGC‑‑AATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AG‑ACACAGATCT‑ACAACGTAATGCGCTGAAACTGTGGCAGGATGCGAGCTG‑A‑‑TTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTG‑aaaa                                                                                               <  1:89266‑M2/203‑1 (MQ=255)                                                                                                                                                                                                                                                            gctatgaaaccgtgcgtcctaatgtagccgttgctgcattgagtttttgctccttctcccaaaccaaC‑G‑TTTATG‑AAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAg                                                                                                                                           >  1:1135473‑M2/68‑229 (MQ=255)                                                                                                                                                                                                                                                                tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAAGGCCGGGACTG‑AAAAAACTGCt                                                                                        <  1:503127‑M2/213‑1 (MQ=255)                                                                                                                                                                                                                                                                    gCCACGGAACC‑GGGACACC‑AACATGGTAATGCAG‑AGCC‑TTC‑‑TCCCCAAACCAAC‑G‑TTTATGAAAATGAA‑GAAAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACtgt                                                                                                                                                                       <  1:503124/192‑1 (MQ=255)                                                                                                                                                                                                                                                                            gtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGa                                                                                                                                     <  1:89271‑M2/169‑1 (MQ=255)                                                                                                                                                                                                                                                                                           ttgctgcattgagttttgctccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTGAA‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCg                                                                                                                   <  1:89269‑M2/188‑1 (MQ=255)                                                                                                                                                                                                                                                                                                               ccttctcccaaaccaaC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCTAACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATa                                                                                                                                   <  1:1241628‑M2/172‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                   t‑cCCAAACCAAC‑GTTTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑ATTTTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTGAAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTTGTCGTGCtggtgg  >  1:89272/1‑312 (MQ=255)                                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                            AATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCC‑TTTGCCAGTTCCGGGT‑ATTCTTCAGCAG‑AAAAAGC‑GGCACCATTG‑CA‑TTTCAGCCAGCCTGTTGGCGGAG‑T‑GGCTGAAGGCCACGGAACC‑GGGACACC‑AACA‑GGTAATGCAG‑AGCC‑TTC‑‑T‑CCCAAACCAAC‑G‑TTTATGAAAATGAA‑G‑AAATAACAAGC‑AAATGGCATCATTCCTGCTTTTACCA‑GGGGGA‑TTTAAC‑ATGCTTATT‑GGCTATGTACGCGTATCAAC‑AAATGACC‑AGAACACAGATCT‑ACAACGTAATGCGCTG‑AACTGT‑GCAGGATGCGAGCTG‑A‑TTTTTGAAGACAAGATAAGCGGCACAAAGTCCG‑AAAGGCCGGGACTG‑AAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTTGTCGTGCTGGTGG  >  NC_000913/1209317‑1209916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.