| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 279163 = | NA (NA) | 217 (4.340) | 44/126 | 0.0 | 73.8% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 890745 | 77 (1.540) | coding (9/258 nt) | grxA | reduced glutaredoxin 1 | |||||
Only 100 of 229 total aligned reads displayed.
AGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/279227‑279163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATTG < NC_000913/890745‑890682 AGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:1442928/65‑1AGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:2389938/1‑65AGCATGACAAAGTCATCGGGCATTATCTGAAAATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:434592/1‑65 GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC < 1:260493/65‑1 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCG < 1:2894322/65‑1 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCG < 1:134011/65‑1 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCG < 1:150545/65‑1 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCtg > 1:594850/1‑63 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGT > 1:974371/1‑65 accAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTAT > 1:3848052/4‑65 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTAT > 1:1026605/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTT > 1:444344/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTT > 1:182047/1‑65 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTT > 1:3661899/1‑65 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCG < 1:709961/65‑1 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCG < 1:5066/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTC > 1:272060/1‑65 cagTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGG < 1:1262652/62‑1 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGG < 1:2572039/65‑1 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGG > 1:1989826/1‑65 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTG < 1:1291675/65‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGC > 1:3546130/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGC > 1:3057555/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGC > 1:2419158/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGC > 1:286856/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGC > 1:854565/1‑65 caGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:74061/63‑1 CTGAACATAAAGCCCTATCAATAAGTTGGAGTCATTCCCCGTTATTGTTGGTCGTTCGGGTTGCC < 1:432607/65‑1 CTGAACATAAACCACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1786380/65‑1 CTGAACATAAAACGCTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1954167/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1058207/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3225428/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:968715/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:946217/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3234595/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:881741/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3269292/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3302188/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3350290/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:761791/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3381041/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:656384/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:346387/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:634707/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:539219/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3734123/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3766235/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3880077/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:3993917/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2030516/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1697260/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2221929/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2298739/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2169914/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1358242/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2146616/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1261882/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:270276/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2806854/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:2951438/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1081515/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCC < 1:1866295/65‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATGTTTGGTCGTGCGGGTTGCC < 1:163999/65‑1 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCT < 1:3810792/65‑1 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCT < 1:1733699/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTA > 1:2104708/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTA > 1:3110037/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTA < 1:610133/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTA < 1:1280998/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTA < 1:3145034/65‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTCTGGTCGTTCGGGTTGCCCTTAC > 1:3591922/1‑65 ATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACT > 1:1224216/1‑65 ATAAAACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACT > 1:422713/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:457443/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:1497508/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:3129882/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:405786/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:227002/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTG > 1:2652684/1‑65 CACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGC > 1:320483/1‑65 CACTATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGC > 1:3745719/1‑65 ATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGC > 1:3650706/1‑65 ATCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGC > 1:1582655/1‑65 TCAATAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCA < 1:79183/65‑1 TAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAG < 1:4017646/65‑1 TAAGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAG < 1:1155230/65‑1 AGTTGGAGTCATTACCCGTTATTTTTGGTTGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGAT > 1:3426390/1‑65 AGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGAT > 1:3298939/1‑65 AGTTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCCTGCAAAAGAT > 1:1942847/1‑65 TTGGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCT > 1:2592400/1‑65 GGAGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGG < 1:3183220/65‑1 AGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCc > 1:1416620/1‑64 AGTCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCT > 1:57245/1‑65 TCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGA > 1:51039/1‑65 TCATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGA > 1:3984605/1‑65 ATTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGA < 1:2521495/65‑1 TTACCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAA > 1:3958389/1‑65 CCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATT > 1:2369793/1‑65 CCCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATT > 1:2065681/1‑65 CCGTTATTTTTCGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATTG > 1:1385175/1‑65 AGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/279227‑279163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATTG < NC_000913/890745‑890682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |