| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 485,977 | IS5 (+) +4 bp | coding (217‑220/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 52 (1.040) | 29/134 | 0.1 | 92.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 485977 = | 4 (0.090) | coding (217/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 485980 | 4 (0.090) | 55 (1.100) | 30/134 | 0.1 | 92.8% | coding (220/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR |
| ? | NC_000913 | = 575785 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/274021‑273955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTC > NC_000913/485977‑486043 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCTCGCTTATTCGCACCTTCCC > 1:2113306/1‑68CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC > 1:1182043/1‑68CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC > 1:1209791/1‑68CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC < 1:2167298/68‑1 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGA < 1:908389/68‑1 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGA < 1:71491/68‑1 ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAG < 1:2365526/68‑1 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGC > 1:3741316/1‑68 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAG > 1:971259/1‑68 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAG < 1:204094/68‑1 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAG > 1:1595538/1‑68 GAAATGAAATGACTGAGTCAGCCGAGACGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGT < 1:3413350/68‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGT < 1:1711816/68‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGC < 1:3019744/68‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGC > 1:2093742/1‑68 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAA > 1:3199120/1‑68 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAA > 1:467543/1‑68 AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCC < 1:3620403/68‑1 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCT > 1:2036888/1‑68 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCT > 1:3358149/1‑68 GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGC < 1:3032453/68‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCG > 1:1239659/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCCGGCAACATTCCCTGGCGA > 1:2453759/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGA > 1:3822168/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGA > 1:3571363/1‑68 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGA < 1:1531443/68‑1 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGA > 1:1784617/1‑68 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAT > 1:1035720/1‑68 AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATC < 1:3808591/68‑1 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAC < 1:3029764/68‑1 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAC > 1:1252870/1‑68 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAC > 1:3918210/1‑68 GAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACT < 1:382169/68‑1 GAATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACT < 1:2843471/68‑1 GAATTCCCCCGCTTATTCGCCCCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACT < 1:2242616/68‑1 ATTTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCT > 1:38033/1‑68 TTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCA > 1:2211846/1‑68 TTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCA > 1:892711/1‑68 TTCCCCGCTTATTCGCACCTTCCCTAGAGCTTGAGGATCAGGCAAAATTCCCTGGCGATCCACTCTCA > 1:2361770/1‑68 TCCCCGCTTATTCGCACCTTCCCTATAGCTTGAGTATGAGGCAAAATCCCCTGGCGATCCACTCTCAG < 1:164143/68‑1 CCCGCTTATTCGCCCCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTA < 1:1977410/68‑1 CCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTA < 1:389026/68‑1 CCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTA < 1:732510/68‑1 CCCGCTTATTCGCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTA < 1:2720871/68‑1 gccCCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGAT < 1:2828938/65‑1 GCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGAT < 1:3936224/68‑1 GCACCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGAT < 1:832011/68‑1 CCTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATT > 1:1455168/1‑68 CTTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTATCAGTATTAAGAGAGATATTA > 1:274304/1‑68 TTCCCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAA < 1:1868552/68‑1 CCTAGAGCTTGAGTATGAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTC > 1:3477113/1‑68 CCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTC > 1:2965968/1‑68 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/274021‑273955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTC > NC_000913/485977‑486043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |