| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 485,977 | IS5 (+) +4 bp | coding (217‑220/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 52 (1.040) | 29/134 | 0.1 | 92.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 485977 = | 4 (0.090) | coding (217/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 485980 | 4 (0.090) | 55 (1.100) | 30/134 | 0.1 | 92.8% | coding (220/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR |
| ? | NC_000913 | = 575785 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 111 total aligned reads displayed.
TTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATG > NC_000913/485914‑486046 | tttAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGg < 1:1266650‑M1/68‑2 (MQ=255)tttAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGg < 1:1422887‑M1/68‑2 (MQ=255)aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaga < 1:908389‑M2/5‑1 (MQ=255)aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaga < 1:71491‑M2/5‑1 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTagag < 1:2365526‑M2/6‑1 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGc > 1:3741316‑M2/62‑68 (MQ=255) gACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggt < 1:343199‑M1/68‑8 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAg > 1:1595538‑M2/57‑68 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAg < 1:204094‑M2/12‑1 (MQ=255) gaaatgaaatgactgagtcagccgagacgaatttccccgcttattcgcaccttccCTAGAGCTTGAGt < 1:3413350‑M2/13‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGt < 1:1711816‑M2/13‑1 (MQ=255) cAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgc < 1:291035‑M1/68‑10 (MQ=255) cAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgc < 1:786526‑M1/68‑10 (MQ=255) tCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaac > 1:3497874‑M1/1‑55 (MQ=255) cGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaaca > 1:1701826‑M1/1‑54 (MQ=255) gATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaag < 1:2243967‑M1/68‑17 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGc < 1:3019744‑M2/20‑1 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGc > 1:2093742‑M2/49‑68 (MQ=255) aTTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagt < 1:1910421‑M1/68‑18 (MQ=255) tttGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtc < 1:3341780‑M1/68‑19 (MQ=255) tttGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtc > 1:1218354‑M1/1‑50 (MQ=255) tttGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtc > 1:1519639‑M1/1‑50 (MQ=255) tttGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtc > 1:782904‑M1/1‑50 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCaaaa > 1:3199120‑M2/45‑68 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCaaaa > 1:467543‑M2/45‑68 (MQ=255) gTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAAt < 1:4091083/68‑1 (MQ=255) tCAGTGNGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctga < 1:2609130‑M1/68‑24 (MQ=255) tCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctga < 1:3724812‑M1/68‑24 (MQ=255) tCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctga > 1:1293538‑M1/1‑45 (MQ=255) tCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctga < 1:2105065‑M1/68‑24 (MQ=255) tCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagcccctga > 1:3894539‑M1/1‑45 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTcc < 1:3620403‑M2/28‑1 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCt > 1:3358149‑M2/39‑68 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCt > 1:2036888‑M2/39‑68 (MQ=255) gagaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatga < 1:3898137‑M1/68‑29 (MQ=255) gagaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatga < 1:2292983‑M1/68‑29 (MQ=255) gagaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatga < 1:92103‑M1/68‑29 (MQ=255) gagaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatga < 1:1522054‑M1/68‑29 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGc < 1:3032453‑M2/33‑1 (MQ=255) agaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgag < 1:3297409‑M1/68‑30 (MQ=255) gaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgaga < 1:1436732‑M1/68‑31 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCg > 1:1239659‑M2/35‑68 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCCGGCAACATTCCCTGGCGa > 1:2453759‑M2/34‑68 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGa > 1:1784617‑M2/34‑68 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGa < 1:1531443‑M2/35‑1 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGa > 1:3822168‑M2/34‑68 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGa > 1:3571363‑M2/34‑68 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAt > 1:1035720‑M2/33‑68 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATc < 1:3808591‑M2/37‑1 (MQ=255) agaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAc < 1:3029764‑M2/40‑1 (MQ=255) agaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAc > 1:3918210‑M2/29‑68 (MQ=255) agaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAc > 1:1252870‑M2/29‑68 (MQ=255) gaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAct < 1:382169‑M2/41‑1 (MQ=255) gaatttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAct < 1:2843471‑M2/41‑1 (MQ=255) gaattcccccgcttattcgccccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCAct < 1:2242616‑M2/41‑1 (MQ=255) gAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtt < 1:386260‑M1/68‑38 (MQ=255) gAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtt < 1:1755709‑M1/68‑38 (MQ=255) atttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActct > 1:38033‑M2/26‑68 (MQ=255) aCTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg > 1:1323902‑M1/1‑29 (MQ=255) aCTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg > 1:3430640‑M1/1‑29 (MQ=255) aCTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg > 1:1837207‑M1/1‑29 (MQ=255) ttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCa > 1:2211846‑M2/24‑68 (MQ=255) ttccccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCa > 1:892711‑M2/24‑68 (MQ=255) ttccccgcttattcgcaccttccCTAGAGCTTGAGGATCAGGCAAAATTCCCTGGCGATCCACTCTCa > 1:2361770‑M2/24‑68 (MQ=255) tccccgcttattcgcaccttccCTATAGCTTGAGTATGAGGCAAAATCCCCTGGCGATCCACTCTCAg < 1:164143‑M2/46‑1 (MQ=255) cccgcttattcgccccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTa < 1:1977410‑M2/48‑1 (MQ=255) cccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTa < 1:732510‑M2/48‑1 (MQ=255) cccgcttattcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTa < 1:2720871‑M2/48‑1 (MQ=255) cAGAATCCAATATTGGTGAACTGGAGCTTGAGTATCAGGCAAAATCCCCTGGCGATCCACTCTCAGTa < 1:2202232/68‑1 (MQ=255) tCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:2992095‑M1/1‑19 (MQ=255) tCCAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:2469151‑M1/1‑19 (MQ=255) cAATATTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 1:2934821‑M1/68‑52 (MQ=255) atatTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:1273155‑M1/68‑54 (MQ=255) atatTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:4052879‑M1/1‑15 (MQ=255) atatTGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:2703027‑M1/1‑15 (MQ=255) gccccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGat < 1:2828938‑M2/59‑1 (MQ=255) gcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGat < 1:832011‑M2/59‑1 (MQ=255) gcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGat < 1:3936224‑M2/59‑1 (MQ=255) atTGGTGAACTAGggaaggtgcgaacaagtccctgataggagatcatgttggtcatctggagccatag < 1:2669477‑M1/68‑56 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:3563415‑M1/68‑57 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:123338‑M1/68‑57 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:3980689‑M1/68‑57 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:1884142‑M1/68‑57 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:2807255‑M1/68‑57 (MQ=255) ttGGTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:1451472‑M1/68‑57 (MQ=255) tgggtgAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:149361‑M1/66‑57 (MQ=255) ggTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:1752699‑M1/1‑10 (MQ=255) ggTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATAtt > 1:1424689/1‑68 (MQ=255) ccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATAtt > 1:1455168‑M2/7‑68 (MQ=255) cttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTATCAGTATTAAGAGAGATATTa > 1:274304‑M2/6‑68 (MQ=255) ttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTaa < 1:1868552‑M2/64‑1 (MQ=255) tGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag > 1:1853386‑M1/1‑8 (MQ=255) gAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 1:19772‑M1/68‑62 (MQ=255) cCTAGAGCTTGAGTATGAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTc > 1:3477113‑M2/2‑68 (MQ=255) cCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTc > 1:2965968‑M2/2‑68 (MQ=255) tAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCAt < 1:677742/68‑1 (MQ=255) tAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCAt < 1:289129/68‑1 (MQ=255) tAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCAt > 1:1278187/1‑68 (MQ=255) aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:4084947‑M1/68‑67 (MQ=255) aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:2852097‑M1/68‑67 (MQ=255) | TTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATG > NC_000913/485914‑486046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |