| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,635,363 | IS5 (–) +4 bp | intergenic (‑53/‑155) | rob ← / → creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 55 (1.320) | 27/128 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4635366 | 0 (0.000) | intergenic (‑56/‑155) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 70 (1.680) | 33/128 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4635363 = | 0 (0.000) | intergenic (‑53/‑158) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2288981‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGA < NC_000913/4635366‑4635306 gACATGAAGAAATGAAATGTCTGAGTCAGCCGAGAACAATTTCCCCGCTTATTCGCACCTTCCCT < 1:378611/64‑1AACNTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:2143183/65‑1AACATGAAGAAATGAACTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:2950787/65‑1AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:2153608/65‑1AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:1523045/65‑1AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:97648/65‑1AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:1735258/65‑1AACATGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:1907074/65‑1 gCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA < 1:346322/64‑1 ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA < 1:470091/65‑1 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAT < 1:672256/65‑1 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAT > 1:1040462/1‑65 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAT > 1:2960667/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTTGCACCTTCCCTATTATCC > 1:1540157/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCC > 1:151255/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCC < 1:1540231/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCA < 1:1255622/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCA < 1:41415/65‑1 AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAA < 1:484050/65‑1 TGAACTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTA < 1:3243514/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTAC < 1:2447078/65‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCT > 1:2430901/1‑65 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:3299338/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:943747/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:561489/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:1342923/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:2051881/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:3059592/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:1850289/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:2864195/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGA < 1:1926769/65‑1 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATG > 1:1672826/1‑65 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATG > 1:537666/1‑65 CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGT < 1:2167717/65‑1 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCTCTATTATCCAATTACCTGATGTC > 1:969881/1‑65 GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCA < 1:1733505/65‑1 AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAG > 1:505152/1‑65 CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTG < 1:2306046/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGC < 1:2852473/65‑1 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTCATGTCAGGTGCTCG > 1:1543753/1‑65 AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTT < 1:907388/65‑1 AGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTT > 1:2497790/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTT > 1:1066170/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTT > 1:1091146/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTT > 1:1882974/1‑65 TTCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAG < 1:1882457/65‑1 TCCCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGG < 1:692309/65‑1 CCCCGCTTATTCTCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGA < 1:2389078/65‑1 CCCGCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGAT > 1:444982/1‑65 GCTTATTCGCACCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAG < 1:1443956/65‑1 CCTTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATG > 1:710503/1‑65 TTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGg < 1:2885817/65‑2 TTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGA < 1:1707368/65‑1 TTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGA < 1:629333/65‑1 TTCCCTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGA < 1:1993957/65‑1 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2288981‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTATCCAATTACCTGATGTCAGGTGCTCGTTGTTGAAAGGATGAGGATATTTTATGGA < NC_000913/4635366‑4635306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |