| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,635,363 | IS5 (–) +4 bp | intergenic (‑53/‑155) | rob ← / → creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 55 (1.320) | 27/128 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4635366 | 0 (0.000) | intergenic (‑56/‑155) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 70 (1.680) | 33/128 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4635363 = | 0 (0.000) | intergenic (‑53/‑158) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3653167‑3653230‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGG > NC_000913/4635363‑4635421 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCA > 1:1066144/1‑65AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCA > 1:1751437/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAT > 1:863631/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAT > 1:1935396/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAT > 1:2894308/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAT > 1:1706781/1‑65 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATA > 1:1019689/1‑65 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATA > 1:1840979/1‑65 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAG > 1:2644976/1‑65 GTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCAT < 1:136151/65‑1 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:920908/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:2641037/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:1628572/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:3363213/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:347215/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:596616/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTT > 1:615149/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCCTCCATAGCATTT > 1:1740508/1‑65 CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTT > 1:73932/1‑65 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGC > 1:1750890/1‑65 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGC > 1:1825897/1‑65 GGCTCCAGATGACAAACATGATCTCATATCACGGACTTGTTCGCACCTTCCATAGCATTTTTTGC > 1:275886/1‑65 GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCT < 1:158657/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGT < 1:3001529/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGT < 1:2987628/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGT < 1:2706831/65‑1 CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTT < 1:430731/65‑1 CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTT < 1:1536824/65‑1 AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTT < 1:878345/65‑1 ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAG > 1:3297807/1‑65 ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCAT < 1:1238655/65‑1 AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCAcct > 1:644435/1‑62 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCA > 1:452806/1‑65 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCA > 1:165728/1‑65 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCA < 1:1299264/65‑1 ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAG > 1:1178406/1‑65 CATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGT < 1:2403739/65‑1 CATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGT > 1:898899/1‑65 TGATCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGT < 1:340029/65‑1 TCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTT > 1:749117/1‑65 TCTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTT > 1:1040300/1‑65 TCTCATATCAGGGACTTGTTCGCACCTCCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTT > 1:831849/1‑65 CTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTT > 1:1782693/1‑65 CTCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTT > 1:2720721/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTT > 1:2810979/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTT > 1:2752599/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTT < 1:359386/65‑1 TCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTT > 1:1934114/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTT > 1:2138882/1‑65 ATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTT > 1:3002201/1‑65 ATCAGGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTT < 1:2832175/65‑1 GGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTA > 1:776635/1‑65 GGGACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTA > 1:2472820/1‑65 gtCTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGA < 1:16784/63‑1 GACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGA > 1:2262185/1‑65 GACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGA > 1:794194/1‑65 GACTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGA > 1:2516563/1‑65 CTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGT < 1:3360447/65‑1 CTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGT < 1:2922600/65‑1 CTTGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGT > 1:2912222/1‑65 TGTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTAT < 1:551591/65‑1 GTTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATG < 1:1499695/65‑1 TTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGT < 1:2058619/65‑1 TTCGCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGT < 1:256821/65‑1 GCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTT > 1:1869059/1‑65 GCACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTA > 1:2336661/1‑65 GCACCCTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTT > 1:371726/1‑65 ACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAG > 1:1462869/1‑65 ACCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAG > 1:781363/1‑65 CCTTCCATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGG < 1:2000799/65‑1 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3653167‑3653230‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGG > NC_000913/4635363‑4635421 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |