| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,635,363 | IS5 (–) +4 bp | intergenic (‑53/‑155) | rob ← / → creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 55 (1.320) | 27/128 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4635366 | 0 (0.000) | intergenic (‑56/‑155) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 70 (1.680) | 33/128 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4635363 = | 0 (0.000) | intergenic (‑53/‑158) | rob/creA | DNA‑binding transcriptional dual regulator Rob/PF05981 family protein CreA | |||||
Only 100 of 118 total aligned reads displayed.
GGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGA > NC_000913/4635299‑4635427 | aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcca > 1:1066144‑M2/65‑65 (MQ=255) accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAt > 1:1935396‑M2/64‑65 (MQ=255) accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAt > 1:1706781‑M2/64‑65 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATa > 1:1019689‑M2/63‑65 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATa > 1:1840979‑M2/63‑65 (MQ=255) ccTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataata > 1:2178641/1‑65 (MQ=255) ccTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataata > 1:1471173/1‑65 (MQ=255) ccTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGataata > 1:1341286/1‑65 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAg > 1:2644976‑M2/62‑65 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAt < 1:136151‑M2/7‑1 (MQ=255) tCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaa < 1:1707368‑M2/65‑5 (MQ=255) tCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaa < 1:629333‑M2/65‑5 (MQ=255) tCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaa < 1:1993957‑M2/65‑5 (MQ=255) cccaTAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaa < 1:2885817‑M2/64‑5 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:347215‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:615149‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:1628572‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:2641037‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:920908‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAttt > 1:3363213‑M2/57‑65 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccctccATAGCAttt > 1:1740508‑M2/57‑65 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCAtttt > 1:73932‑M2/56‑65 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGc > 1:1825897‑M2/52‑65 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGc > 1:1750890‑M2/52‑65 (MQ=255) ggctccagatgacaaacatgatctcatatcacggacttgttcgcaccttccATAGCATTTTTTGc > 1:275886‑M2/52‑65 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCt < 1:158657‑M2/15‑1 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGt < 1:2987628‑M2/17‑1 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGt < 1:3001529‑M2/17‑1 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGt < 1:2706831‑M2/17‑1 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGtt < 1:430731‑M2/18‑1 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGtt < 1:1536824‑M2/18‑1 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGtttt < 1:878345‑M2/20‑1 (MQ=255) atgacaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAg > 1:3297807‑M2/44‑65 (MQ=255) tCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgagaataagcgggg < 1:2389078‑M2/65‑22 (MQ=255) acaaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCAt < 1:1238655‑M2/25‑1 (MQ=255) ccTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcgggga < 1:692309‑M2/65‑23 (MQ=255) cTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaa < 1:1882457‑M2/65‑24 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTagcacct > 1:644435‑M2/39‑62 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCa > 1:165728‑M2/38‑65 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCa < 1:1299264‑M2/28‑1 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCa > 1:452806‑M2/38‑65 (MQ=255) catgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAgt < 1:2403739‑M2/30‑1 (MQ=255) catgatctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAgt > 1:898899‑M2/36‑65 (MQ=255) aacaacGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattct > 1:1066170‑M2/1‑37 (MQ=255) aacaacGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattct > 1:1091146‑M2/1‑37 (MQ=255) tctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttt > 1:1040300‑M2/31‑65 (MQ=255) tctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttt > 1:749117‑M2/31‑65 (MQ=255) tctcatatcagggacttgttcgcacctcccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttt > 1:831849‑M2/31‑65 (MQ=255) aacGAGCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttct < 1:907388‑M2/65‑32 (MQ=255) ctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttt > 1:1782693‑M2/30‑65 (MQ=255) ctcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttt > 1:2720721‑M2/30‑65 (MQ=255) tcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttttt > 1:1934114‑M2/29‑65 (MQ=255) tcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttttt < 1:359386‑M2/37‑1 (MQ=255) tcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttttt > 1:2810979‑M2/29‑65 (MQ=255) tcatatcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttttt > 1:2138882‑M2/29‑65 (MQ=255) cGAGCACCTGACATGAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcg > 1:1543753‑M2/1‑32 (MQ=255) gCACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggct < 1:2852473‑M2/65‑37 (MQ=255) cACCTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctg < 1:2306046‑M2/65‑38 (MQ=255) atcagggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCtt < 1:2832175‑M2/41‑1 (MQ=255) cTGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgact > 1:505152‑M2/1‑25 (MQ=255) tGACATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactc < 1:1733505‑M2/65‑42 (MQ=255) gggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagta > 1:776635‑M2/21‑65 (MQ=255) gggacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTtagta > 1:2472820‑M2/21‑65 (MQ=255) gacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTaga > 1:794194‑M2/19‑65 (MQ=255) gacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTaga > 1:2516563‑M2/19‑65 (MQ=255) gacttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTaga > 1:2262185‑M2/19‑65 (MQ=255) aCATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcag < 1:2167717‑M2/65‑44 (MQ=255) cATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:1672826‑M2/1‑21 (MQ=255) cATCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:537666‑M2/1‑21 (MQ=255) cttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGt < 1:2922600‑M2/49‑1 (MQ=255) cttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGt > 1:2912222‑M2/17‑65 (MQ=255) cttgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGt < 1:3360447‑M2/49‑1 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:943747‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:1342923‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:1850289‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:1926769‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:561489‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:3299338‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:3059592‑M2/65‑47 (MQ=255) tCAGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:2864195‑M2/65‑47 (MQ=255) tgttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTAt < 1:551591‑M2/51‑1 (MQ=255) gttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATg < 1:1499695‑M2/52‑1 (MQ=255) aGGTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 1:2430901‑M2/1‑17 (MQ=255) ttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGt < 1:256821‑M2/53‑1 (MQ=255) ttcgcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGt < 1:2058619‑M2/53‑1 (MQ=255) gTAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 1:2447078‑M2/65‑51 (MQ=255) tAATTGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcagttca < 1:3243514‑M2/65‑52 (MQ=255) gcaccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGtttt > 1:1869059‑M2/10‑65 (MQ=255) gcaccctccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGtttt > 1:371726‑M2/10‑65 (MQ=255) ttGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 1:484050‑M2/65‑55 (MQ=255) accttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAg > 1:1462869‑M2/8‑65 (MQ=255) accttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAg > 1:781363‑M2/8‑65 (MQ=255) tGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 1:1255622‑M2/65‑56 (MQ=255) tGGATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 1:41415‑M2/65‑56 (MQ=255) ccttccATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAgg < 1:2000799‑M2/59‑1 (MQ=255) ggATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct > 1:151255‑M2/1‑9 (MQ=255) ggATAATAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct < 1:1540231‑M2/65‑57 (MQ=255) ataGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg < 1:672256‑M2/65‑62 (MQ=255) ataGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg > 1:1040462‑M2/1‑4 (MQ=255) ataGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg > 1:2960667‑M2/1‑4 (MQ=255) | GGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGA > NC_000913/4635299‑4635427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |