| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (+) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 15387 = | NA (NA) | 76 (1.470) | 29/120 | 0.1 | 100% | noncoding (1/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 458795 | 0 (0.000) | intergenic (+95/‑93) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease | |||||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 57 (1.080) | 24/122 | 0.3 | 100% | intergenic (+90/‑98) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| ? | NC_000913 | = 609350 | NA (NA) | noncoding (1344/1345 nt) | IS186 | repeat region | |||||
TCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/458853‑458790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC < NC_000913/609350‑609285 TCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCC < 1:2063303/65‑1TCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCC > 1:757127/1‑65TCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCC > 1:2777738/1‑65 AGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCC > 1:2217065/1‑65 CACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGC < 1:4174847/65‑1 CACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGC < 1:3050696/65‑1 CGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGC > 1:1861519/1‑65 ACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTA > 1:2184624/1‑65 CTGTGCTTCACGCCATCTATTAACACGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAA > 1:2882131/1‑65 agGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACT < 1:4228235/63‑1 GTGCTTCACGCCATCTATTGACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACT < 1:1816235/65‑1 GTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACT < 1:3929772/65‑1 GTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACT < 1:1591502/65‑1 GTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACT < 1:94208/65‑1 GCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTA > 1:3203668/1‑65 GCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTA > 1:2459346/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:4072202/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:912927/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:1065176/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:1715347/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:147083/1‑65 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAG > 1:1137882/1‑65 TCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGG < 1:2060449/65‑1 TCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGG < 1:1581004/65‑1 cACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:4257035/2‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:4310338/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:3975131/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:3740892/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:3633938/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:4076187/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:4246655/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:2389236/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:2276342/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:2117504/1‑65 CATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCCGAAG > 1:3712188/1‑65 ATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGA < 1:1125289/65‑1 TGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAA > 1:2546063/1‑65 TGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACNTAAGGGTTGAACCATCTGAAGAA > 1:3420579/1‑65 GTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT < 1:1259360/65‑1 GTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGA > 1:1049700/1‑65 GTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGA > 1:1536497/1‑65 AGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGC > 1:866506/1‑65 GTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCC < 1:4326013/65‑1 ATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC > 1:1178048/1‑65 ATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTCGAACCATCTGAAGAATGCGACGCCTC < 1:1758700/65‑1 agTGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 1:151057/63‑1 ATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG < 1:2307785/65‑1 TGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:3312130/65‑1 GGGATGTTTCCCCATAAGCGCTACCTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:3780083/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:1253585/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:219338/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:1483602/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:3777364/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:3997336/1‑65 GGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:567509/1‑65 GGGATGTTTCCCCATAAGCGCTAACTCAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC > 1:4102220/1‑65 GATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT > 1:3457721/1‑65 GATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT > 1:3160084/1‑65 GATGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT < 1:2916257/65‑1 TGTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCG > 1:620902/1‑65 GTTTCCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGT < 1:2898384/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATGTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA < 1:2154012/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA < 1:1965589/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:1426478/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:2196797/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:519534/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:439842/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA < 1:2959890/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA < 1:3285534/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:3302398/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA < 1:1833519/65‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA > 1:3655680/1‑65 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGCGCCTCGTTAAGA > 1:2358108/1‑65 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC < 1:1671647/65‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC < 1:3855083/65‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC < 1:3981323/65‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGNTAAGAC < 1:2573844/65‑1 TCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/458853‑458790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC < NC_000913/609350‑609285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |