| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (+) +8 bp | coding (362‑369/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 93 (1.730) | 39/128 | 0.0 | 97.6% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 2 (0.040) | coding (362/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 20 (0.380) | 13/126 | 1.0 | 89.7% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 2 (0.040) | coding (369/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/290695‑290634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG > 1:2551080/1‑65ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG > 1:744116/1‑65ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG > 1:477534/1‑65ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG > 1:2765857/1‑65 TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGA < 1:2445927/65‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAA < 1:1475134/65‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAA > 1:3676529/1‑65 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAA > 1:3977719/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑G < 1:558693/65‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑G < 1:3241458/65‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑G > 1:1758874/1‑65 GTCATCGGGCATTATCTGCACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:4328376/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:1106573/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:2688266/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:22284/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:344275/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT > 1:1889142/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCT < 1:4079512/65‑1 TCATCGGGCATTATCTGAACATAAAACACTGTCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTG > 1:2426988/1‑65 TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTG > 1:247933/1‑65 CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGT < 1:3261827/65‑1 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGc > 1:3232573/1‑64 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGT < 1:3604553/65‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTG < 1:2801667/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGC > 1:1807979/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGC > 1:3567391/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGC > 1:2397310/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGC > 1:1555943/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGC > 1:2461835/1‑65 ATCTGAACATAAAGCACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGG < 1:2840725/65‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGG < 1:2053159/65‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGG < 1:4028147/65‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAGT‑GGCTGTTGTGCAACAGGC > 1:2878212/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGC < 1:1148485/65‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGC > 1:3457551/1‑65 gCATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:2434776/64‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGTACAAC < 1:1928289/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:664873/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:749246/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:4217440/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:3571393/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAC < 1:1318972/65‑1 CATAAAGCACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG < 1:1925184/65‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG < 1:3958395/65‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG < 1:4346190/65‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG > 1:3351457/1‑65 CATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG < 1:1402509/65‑1 CATAAAACACTATCAATAAGTTGGAATCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACG < 1:2502888/65‑1 TAAAACACTATCAATAACTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTA < 1:3077569/65‑1 AAACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAAT < 1:1611320/65‑1 ACACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCT > 1:488648/1‑65 CACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTC > 1:3997933/1‑65 ACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCT > 1:2201439/1‑65 ACTATCAATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCT > 1:1237873/1‑65 AATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGG < 1:4229620/65‑1 AATAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGG < 1:3608436/65‑1 TAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAc > 1:2997435/1‑64 TAAGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTCGAA > 1:716553/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG > 1:894516/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG > 1:4253114/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG > 1:1496357/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 1:1941120/65‑1 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG > 1:4339208/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG > 1:3933594/1‑65 AGTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGAAATCTCTGTCTGGAAAG > 1:3599056/1‑65 GTTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGT < 1:566209/65‑1 TTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTT > 1:1575481/1‑65 TTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTT > 1:3646386/1‑65 TTGGAGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCAAAACGTAATCTCTGTCTGGAAAGTT > 1:1434219/1‑65 AGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGA > 1:824784/1‑65 AGTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGA > 1:237325/1‑65 AGTCATTACCGAGAAAT‑GGCCGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGA > 1:2424907/1‑65 GTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC < 1:3759809/65‑1 GTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC < 1:2709625/65‑1 GTCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC > 1:333752/1‑65 TCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACC > 1:3710991/1‑65 TCATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAAAGTAATCTCTGTCTGGAAAGTTATGACC > 1:3796204/1‑65 ATTGCCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:703238/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:2679887/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:683252/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:974170/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:4291927/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:3405635/65‑1 ATTACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:3437995/65‑1 ACCGAGAAATGGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTAT > 1:2523117/1‑65 ACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATA > 1:1271250/1‑65 ACCGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATA > 1:4271135/1‑65 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAGCGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:3759986/65‑1 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:1251233/65‑1 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:3732271/65‑1 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:1629243/65‑1 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:3541806/65‑1 CGAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:2386409/65‑1 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/290695‑290634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAAT‑GGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |