| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (+) +8 bp | coding (362‑369/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 93 (1.730) | 39/128 | 0.0 | 97.6% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 2 (0.040) | coding (362/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 20 (0.380) | 13/126 | 1.0 | 89.7% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 2 (0.040) | coding (369/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291337‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGT < NC_000913/486129‑486072 caaAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:2579551/62‑1CAGAAGCTACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1216488/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:976697/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:905928/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:4354513/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:3358980/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1931707/65‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCctg > 1:3523765/1‑62 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTT > 1:2189820/1‑65 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACA > 1:3593354/1‑65 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCA < 1:4314680/65‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATT < 1:616593/65‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTG > 1:1842882/1‑65 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAAT < 1:2884326/65‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAAT < 1:937651/65‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAAT < 1:3732604/65‑1 TCATACACAAAATCAGTAAGTCGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAAT < 1:1870483/65‑1 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATg > 1:3582603/1‑64 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:3979165/1‑65 CTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCT > 1:3279145/1‑65 TCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATC > 1:244717/1‑65 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC > 1:2095205/1‑65 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC < 1:3683461/65‑1 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC < 1:2359004/65‑1 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC < 1:1256162/65‑1 GCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCG > 1:3986215/1‑65 CATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGT < 1:1117843/65‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291337‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCGT < NC_000913/486129‑486072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |