| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (+) +8 bp | coding (362‑369/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 89 (1.530) | 38/128 | 0.0 | 98.7% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 1 (0.020) | coding (362/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 28 (0.490) | 12/126 | 1.2 | 96.1% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 1 (0.020) | coding (369/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/290696‑290634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGA < 1:4388219/65‑1 TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGA < 1:4562796/65‑1 ACAAAGTCATCGGGCATTATCTGAACATAAAGCACTATCAATAAGTTGGAGTCATTACCGAGAAA < 1:4589169/65‑1 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAA > 1:4066479/1‑65 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAA > 1:1784260/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATG < 1:3073946/65‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATG > 1:733206/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATG > 1:2011335/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATG > 1:4559952/1‑65 AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGG > 1:231201/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCT > 1:449004/1‑65 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCT > 1:3119651/1‑65 CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGT < 1:3640419/65‑1 CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGT < 1:356992/65‑1 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTT < 1:3758370/65‑1 CGGGCATTATCTGAACATAAAACGCTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGT < 1:771338/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGC > 1:164388/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGC > 1:394937/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGC > 1:3374929/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGC > 1:4461741/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGC > 1:8113/1‑65 GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCA > 1:3158960/1‑65 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAG < 1:2069841/65‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGG < 1:3715594/65‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGG < 1:2850735/65‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:2742534/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:117113/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:2846519/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:3979949/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:3170021/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:4226572/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:1216565/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC > 1:1918943/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC < 1:557468/65‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGCTGTGCAACAGGC > 1:1183248/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGCTGTGCAACAGGC > 1:3910338/1‑65 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:2612916/65‑1 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:1164013/65‑1 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAA > 1:1371010/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC > 1:4061353/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:3627758/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC > 1:1304436/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:535802/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:3162869/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:1943073/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:4510746/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:4404407/65‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:2382339/65‑1 TAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTA < 1:3528089/65‑1 AAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAAT > 1:2092592/1‑65 ACACTCTCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT > 1:4530847/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTTCAACAGGCACAACGTAATCT > 1:502620/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT > 1:1808399/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT > 1:4063668/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT > 1:1526347/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT > 1:4580296/1‑65 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGGTGTGCAACAGGCACAACGCTATCT > 1:4089757/1‑65 gATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGT < 1:1458027/64‑1 TATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGT < 1:2404916/65‑1 ATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTC < 1:3550062/65‑1 CAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTG > 1:1600664/1‑65 AATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCCTGTCTc > 1:4183239/1‑64 TAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAA > 1:4428861/1‑65 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAG > 1:2591856/1‑65 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAG < 1:479179/65‑1 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAG > 1:3146386/1‑65 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAG < 1:666819/65‑1 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCAAAAAGGAATCT‑ATGTCTGGAAAG > 1:2017311/1‑65 AGTTGGAGTCATTACCGAGAAATGGCTGTTATGGAACAGGGACAACGGAATCT‑CTGTCTGGAAAG > 1:232452/1‑65 AGTTGGAGTCATTACCGAGAAATGGCTGATGTGCAACAGGCGCAACGTAATCT‑CTGTCTGGAAAG < 1:2170114/65‑1 GTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGT < 1:2492002/65‑1 GTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGT < 1:4411389/65‑1 TTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTT > 1:3512609/1‑65 TTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTT < 1:4353003/65‑1 AGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGA > 1:332409/1‑65 GTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGAC < 1:4049855/65‑1 TCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAAGTAATTT‑CTGTCTGGAAAGTTATGAac > 1:3884020/1‑63 ATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGT < 1:4142435/65‑1 ATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGT < 1:1470692/65‑1 ATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGT < 1:1251293/65‑1 ATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGT < 1:821111/65‑1 ACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATA > 1:4201723/1‑65 ACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATA > 1:1352430/1‑65 ACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATA > 1:124300/1‑65 ACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGCTATGACCGTATA > 1:3282807/1‑65 CGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA < 1:4485067/65‑1 CGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA < 1:4531306/65‑1 CGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA < 1:2457459/65‑1 CGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA < 1:457285/65‑1 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/290696‑290634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCT‑CTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |