| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (+) +8 bp | coding (362‑369/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 89 (1.530) | 38/128 | 0.0 | 98.7% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 1 (0.020) | coding (362/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 28 (0.490) | 12/126 | 1.2 | 96.1% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 1 (0.020) | coding (369/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291337‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCG < NC_000913/486129‑486073 aAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1441829/64‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1045218/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:3491173/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:3883781/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:2718448/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:43955/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1503364/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:787250/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1389743/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:1181071/65‑1CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:79710/65‑1 aAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCA < 1:3805428/64‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATT > 1:2376903/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTT > 1:443881/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTT > 1:1352560/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTT > 1:4146168/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTT > 1:3460416/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTT > 1:3751553/1‑65 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTG > 1:2341261/1‑65 ATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATAT < 1:206345/65‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATAT < 1:3746116/65‑1 CACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAAT < 1:2444236/65‑1 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:4218152/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:106696/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:2712133/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:2407017/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:1666581/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATC > 1:1134299/1‑65 TCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATC > 1:3466828/1‑65 TCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATC > 1:3820646/1‑65 TCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATC > 1:424239/1‑65 TCAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTCGAATATAATCTCCATC > 1:4560777/1‑65 CAGTAAGTTGGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCA < 1:2940354/65‑1 GGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGAC > 1:3486444/1‑65 GGCAGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGAC > 1:3485215/1‑65 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC < 1:2813754/65‑1 AGCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCC > 1:1357496/1‑65 GCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCG > 1:1445023/1‑65 GCATCACCCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCG > 1:626797/1‑65 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291337‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTTCTCCGACAAATTCGCATTTGTGGAATATAATCTCCATCAATAATCGACGCCG < NC_000913/486129‑486073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |