| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (+) +8 bp | coding (362‑369/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 81 (1.520) | 34/134 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 0 (0.000) | coding (362/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 78 (1.480) | 28/132 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 0 (0.000) | coding (369/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/257974‑257908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAA > NC_000913/486122‑486186 GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1203389/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1906559/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:2650320/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1542025/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1516885/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1503544/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:3562036/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:3988171/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:4048792/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:559919/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1229790/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:752054/1‑68GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTCGGAGTCATTACCG > 1:1745272/1‑68 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGA < 1:2130106/68‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG < 1:2172205/68‑1 ATGACAAAGTCATCGGGCATTATCTGAACACAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAA < 1:3012773/68‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATG < 1:2100591/68‑1 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGG > 1:710416/1‑68 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGT < 1:3302752/68‑1 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGT < 1:1917524/68‑1 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTT > 1:1635640/1‑68 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTT > 1:2922984/1‑68 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTT < 1:4030938/68‑1 ATCGGGCATTATCTGAAGATAAAACACTATCAATAAATTGGAGTCATTACCGAGAAATGGCAGTTGTG < 1:2500895/68‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTCTGCAA > 1:2680/1‑68 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGGGCAAa > 1:1479871/1‑67 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGGTGTGCAACAG > 1:2294779/1‑68 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGG < 1:506763/68‑1 TTATCTGAACATAAAACACTATCAATAAGTTTTAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC < 1:2731820/68‑1 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGC < 1:2006703/68‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACA > 1:563854/1‑68 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACA > 1:221375/1‑68 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACA > 1:3209934/1‑68 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACA > 1:2329877/1‑68 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACA > 1:1726825/1‑68 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:1290289/68‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:1320622/68‑1 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:888239/68‑1 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:3709307/68‑1 cagCATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACG < 1:2021246/65‑1 GAACATAAACCACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACG < 1:3650808/68‑1 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACG < 1:1979922/68‑1 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACG < 1:379259/68‑1 AAACACTATCAATAAGTTGGAGGCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTC < 1:3709852/68‑1 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 1:437524/1‑68 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 1:1410421/1‑68 ACACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTCTGCAACAGCCCCAACGTAATCTCTG > 1:2741902/1‑68 CACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGTACAACGTAATCTCTGT > 1:3845961/1‑68 CACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 1:2135844/1‑68 CACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 1:2105533/1‑68 CACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT < 1:3974119/68‑1 CACTATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGAACAATGTAATCTCTGT > 1:3467934/1‑68 ATCAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGG < 1:1844949/68‑1 CAATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAA > 1:398543/1‑68 ATAAGTTTGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 1:367767/68‑1 ATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 1:1244529/68‑1 ATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 1:1532357/68‑1 ATAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 1:1314291/68‑1 TAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGT > 1:1497863/1‑68 TAAGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGT > 1:4019778/1‑68 TAACTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGT < 1:3845302/68‑1 AGTTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTA > 1:1960258/1‑68 TTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATG > 1:2705224/1‑68 TTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATG > 1:1653715/1‑68 TTGGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATG > 1:1843159/1‑68 GGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC < 1:134486/68‑1 GGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC < 1:4150721/68‑1 GGAGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGAC < 1:1252117/68‑1 AGTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCG > 1:2054959/1‑68 GTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:1937294/68‑1 GTCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:1569540/68‑1 TCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTA > 1:2763655/1‑68 TCATTACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTA > 1:4024633/1‑68 TCATTACCGAGAAATGGCTGTTGGGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTA > 1:2062038/1‑68 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:2290064/68‑1 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:2928859/68‑1 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:1090887/68‑1 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:149022/68‑1 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:609619/68‑1 TACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 1:3404058/68‑1 ACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAA > 1:2681636/1‑68 GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/257974‑257908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAA > NC_000913/486122‑486186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |