| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 4,542,330 | IS1 (–) +9 bp | 39.0% | coding (294‑302/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 36 (0.340) | 31/176 | NT | 36.2% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542338 | 57 (0.590) | coding (302/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 37 (0.350) | 36/176 | NT | 36.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542330 = | 57 (0.590) | coding (294/597 nt) | fimE | regulator for fimA | |||||
Only 100 of 160 total aligned reads displayed.
ATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTC > NC_000913/4542240‑4542436 | aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 2:1402424/99‑1 (MQ=255)aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 1:2306247/99‑1 (MQ=255)aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc > 1:2703780/1‑99 (MQ=255)aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc > 1:682140/1‑99 (MQ=255) ttttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGTCTGACGCg < 2:2728948‑M2/99‑2 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCt > 2:1627508‑M2/90‑99 (MQ=255) tttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCgg > 2:552‑M2/1‑97 (MQ=255) ttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCtat > 1:602031/1‑99 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCtat > 1:1811989‑M2/88‑99 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTatat > 1:1461269‑M2/86‑99 (MQ=255) tACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtatt > 2:317820/1‑99 (MQ=255) ccGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatga > 1:2053298‑M2/1‑91 (MQ=255) ccGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtattta < 1:1636160/99‑1 (MQ=255) ccGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtattta < 2:502184/99‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTAtatttat < 2:1405450‑M2/18‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTAtatttatt < 1:28914‑M2/19‑1 (MQ=255) gTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtatttatt > 1:409530/1‑99 (MQ=255) gTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtatttatt < 2:2768874/99‑1 (MQ=255) gTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtatttatt > 2:2415892/1‑99 (MQ=255) ttCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATatttattt < 2:1305839/99‑1 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTtc > 1:1186177‑M2/79‑99 (MQ=255) cACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTtct > 1:1371114/1‑99 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTtct < 2:2267991‑M2/22‑1 (MQ=255) cccGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaac > 1:2626713‑M2/1‑84 (MQ=255) ccGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTcgc < 1:2813906/99‑1 (MQ=255) cGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTcgcc < 2:48087/99‑1 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTcgccg > 1:645847‑M2/73‑99 (MQ=255) cGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattga < 2:241810‑M2/99‑23 (MQ=255) ttttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAg > 1:788882/1‑99 (MQ=255) ttttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAg < 2:1668943/99‑1 (MQ=255) tttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGt < 1:2102703/99‑1 (MQ=255) ttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTc < 1:1563696/99‑1 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTc < 2:690337‑M2/35‑1 (MQ=255) tgatgaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCg < 1:2368270/99‑1 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCg > 1:431481‑M2/64‑99 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGc < 1:2101119‑M2/38‑1 (MQ=255) tgaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttt > 2:1047605‑M2/1‑69 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCt > 2:2564746‑M2/61‑99 (MQ=255) gaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttt > 1:2141623‑M2/1‑68 (MQ=255) gaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttt < 1:2549724‑M2/99‑32 (MQ=255) aGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttta > 1:180191‑M2/1‑67 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTtct < 1:960199‑M2/43‑1 (MQ=255) cGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatg > 2:216518‑M2/1‑65 (MQ=255) gTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgt > 1:1724379‑M2/1‑64 (MQ=255) gTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgt > 2:57763‑M2/1‑64 (MQ=255) tGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCg > 2:1900112/1‑99 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTttctcc > 2:2115245‑M2/55‑98 (MQ=255) aggCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGTCTTTCTCGcc > 2:947540/3‑99 (MQ=255) aaGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGcc < 2:1611046/99‑1 (MQ=255) gCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcaga > 2:1885364‑M2/1‑59 (MQ=255) ggAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCACCAGCAGGc < 1:2453294/99‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGc < 1:2352878‑M2/54‑1 (MQ=255) gAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgc > 1:2814420‑M2/1‑53 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt < 2:987779‑M2/56‑1 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt > 2:336021‑M2/44‑99 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTa < 2:288570‑M2/57‑1 (MQ=255) aCGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTa > 1:107162/1‑99 (MQ=255) gCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccga > 1:1960903‑M2/1‑49 (MQ=255) gCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATc > 1:947917/1‑99 (MQ=255) gCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATc < 1:2712283/99‑1 (MQ=255) cTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCg < 1:918855/99‑1 (MQ=255) cTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCg > 1:743077/1‑99 (MQ=255) tGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGc > 2:1972933/1‑99 (MQ=255) ggACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 2:1955494‑M2/1‑46 (MQ=255) gACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac > 1:1573208‑M2/1‑45 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCat < 2:1691175‑M2/63‑1 (MQ=255) ccAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 2:1106543‑M2/1‑42 (MQ=255) atacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCattatt < 2:1103321‑M2/67‑1 (MQ=255) aGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 2:2252785‑M2/1‑40 (MQ=255) acactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTcg > 2:1430513‑M2/31‑99 (MQ=255) aCGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcaaataatgcccgatgactttgtcatg > 2:1610814‑M2/1‑36 (MQ=255) tGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGc > 2:794710/1‑99 (MQ=255) cTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCg < 1:2553088/99‑1 (MQ=255) cTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTAt < 2:1206219/99‑1 (MQ=255) cTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTAt < 2:1944929/99‑1 (MQ=255) aaaGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat > 1:2409761‑M2/1‑23 (MQ=255) aGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGc > 2:746530/1‑99 (MQ=255) cgcTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 2:2325949‑M2/1‑18 (MQ=255) cgcTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTgg < 2:526670/99‑1 (MQ=255) agcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTgg > 2:128562‑M2/10‑99 (MQ=255) gcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGa > 1:319390‑M2/9‑99 (MQ=255) cTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGaa > 1:318525/1‑99 (MQ=255) tGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa > 2:1306120‑M2/1‑15 (MQ=255) tGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAAc > 1:2622958/1‑99 (MQ=255) gACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac < 2:1149679‑M2/99‑86 (MQ=255) gACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAAcc > 1:1134529/1‑99 (MQ=255) caccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCg > 1:405069‑M2/5‑99 (MQ=255) ggACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 2:950004‑M2/1‑10 (MQ=255) ggACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTaa < 1:864289/99‑1 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag < 1:2315393‑M2/99‑91 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag > 1:1901443‑M2/1‑9 (MQ=255) gACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAc < 1:1751521/99‑1 (MQ=255) cTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGc > 2:415632/1‑99 (MQ=255) cTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGc > 2:2742476/1‑99 (MQ=255) tGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCa > 2:516067/1‑99 (MQ=255) aCGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGa > 1:2650099/1‑99 (MQ=255) aCGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGa > 1:2164876/1‑99 (MQ=255) cGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGAc < 2:661903/99‑1 (MQ=255) ccggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgtcagcgacttc > 2:2457130‑M2/2‑2 (MQ=255) cTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTc > 2:351145/1‑99 (MQ=255) | ATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTC > NC_000913/4542240‑4542436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |