| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 4,542,330 | IS1 (–) +9 bp | 39.0% | coding (294‑302/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 36 (0.340) | 31/176 | NT | 36.2% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542338 | 57 (0.590) | coding (302/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 37 (0.350) | 36/176 | NT | 36.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542330 = | 57 (0.590) | coding (294/597 nt) | fimE | regulator for fimA | |||||
Only 100 of 169 total aligned reads displayed.
AAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAC > NC_000913/4542232‑4542428 | aagaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCgg > 1:1008030/1‑99 (MQ=255)aagaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCgg > 2:1295689/1‑99 (MQ=255)aagaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCgg > 1:1306120/1‑99 (MQ=255) agaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGa > 2:2381045/1‑99 (MQ=255) agaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGa > 1:2521877/1‑99 (MQ=255) agaaCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGa > 1:2813448/1‑99 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGa < 2:1689536‑M2/6‑1 (MQ=255) aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 1:2306247/99‑1 (MQ=255) aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc > 1:2703780/1‑99 (MQ=255) aTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 2:1402424/99‑1 (MQ=255) ttttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGTCTGACGCg < 2:2728948‑M2/99‑2 (MQ=255) tttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCgg > 2:552‑M2/1‑97 (MQ=255) ttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCtat > 1:602031/1‑99 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCtat > 1:1811989‑M2/88‑99 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTatat > 1:1461269‑M2/86‑99 (MQ=255) ccGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtattta < 1:1636160/99‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTAtatttat < 2:1405450‑M2/18‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTAtatttatt < 1:28914‑M2/19‑1 (MQ=255) gTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAtatttatt > 2:2415892/1‑99 (MQ=255) ttCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATatttattt < 2:1305839/99‑1 (MQ=255) tCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTtc < 2:509038/99‑1 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTtc < 1:2227181‑M2/21‑1 (MQ=255) cACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTtct > 1:1371114/1‑99 (MQ=255) acacGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGGAAGGCGCTGACCGGACTGACGCGATATTTATTtctt > 2:1797733/4‑98 (MQ=255) cccGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaac > 1:2626713‑M2/1‑84 (MQ=255) ccGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaact > 2:2779394‑M2/1‑83 (MQ=255) cGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTcgcc < 2:48087/99‑1 (MQ=255) ttttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAg > 1:788882/1‑99 (MQ=255) ttttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAg < 2:1668943/99‑1 (MQ=255) tttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGt > 1:2640280/1‑99 (MQ=255) ttGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTc < 1:1563696/99‑1 (MQ=255) tgatgaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCg < 1:2368270/99‑1 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCg > 1:431481‑M2/64‑99 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGc < 1:2101119‑M2/38‑1 (MQ=255) tgaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttt > 2:1047605‑M2/1‑69 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCt > 2:2564746‑M2/61‑99 (MQ=255) gaGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttt < 1:2549724‑M2/99‑32 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCttt > 2:2665142‑M2/59‑99 (MQ=255) aGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttta > 1:180191‑M2/1‑67 (MQ=255) aGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgtttta > 1:2138292‑M2/1‑67 (MQ=255) gCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTtc > 1:1989934/1‑99 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTtct < 1:960199‑M2/43‑1 (MQ=255) cGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatg > 2:216518‑M2/1‑65 (MQ=255) gTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgt > 1:1724379‑M2/1‑64 (MQ=255) gTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgt > 2:57763‑M2/1‑64 (MQ=255) tGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCg > 2:1900112/1‑99 (MQ=255) gAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGc < 1:15988/99‑1 (MQ=255) aaGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGcc < 2:1611046/99‑1 (MQ=255) aaGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGcc < 2:1213648/99‑1 (MQ=255) gCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcaga > 2:1885364‑M2/1‑59 (MQ=255) gCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCcag < 2:699129/99‑1 (MQ=255) gTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataa < 1:662316‑M2/99‑44 (MQ=255) gTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCcagcag > 1:828464/1‑99 (MQ=255) gAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgc > 1:2814420‑M2/1‑53 (MQ=255) gAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGcc > 1:2783767/1‑99 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt > 2:336021‑M2/44‑99 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt < 2:987779‑M2/56‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTa > 1:2357199‑M2/43‑99 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTa < 2:288570‑M2/57‑1 (MQ=255) aCGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTa > 1:107162/1‑99 (MQ=255) gCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATc > 1:947917/1‑99 (MQ=255) cTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCg > 1:743077/1‑99 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGc > 1:399475‑M2/39‑99 (MQ=255) ggACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 2:1955494‑M2/1‑46 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCat < 2:1691175‑M2/63‑1 (MQ=255) aCCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact > 1:550632‑M2/1‑44 (MQ=255) ccAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 2:1106543‑M2/1‑42 (MQ=255) ccAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCattat < 1:31392/99‑1 (MQ=255) cAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCattatt < 1:1165295/99‑1 (MQ=255) atacactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCattatt < 2:1103321‑M2/67‑1 (MQ=255) aGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 2:1940270‑M2/99‑60 (MQ=255) aGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 2:2252785‑M2/1‑40 (MQ=255) acactaaatcagtaagttggcagcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTcg > 2:1430513‑M2/31‑99 (MQ=255) tGCTAACTGGAAAGGCGCTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag < 1:2567778‑M2/99‑67 (MQ=255) tGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGc > 2:794710/1‑99 (MQ=255) tGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGc < 2:1614320/99‑1 (MQ=255) aCTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTa < 1:1550284/99‑1 (MQ=255) cTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTAt < 2:1206219/99‑1 (MQ=255) gAAAGGCGCTGACCGGACTGACGCTATA‑TTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGaa > 2:2289854/1‑99 (MQ=255) ggCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCt > 2:2432109/1‑99 (MQ=255) gcgcTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg < 1:2458379‑M2/99‑81 (MQ=255) cgcTGACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 2:2325949‑M2/1‑18 (MQ=255) gcatcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGa > 1:319390‑M2/9‑99 (MQ=255) cTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGaa < 2:1958535/99‑1 (MQ=255) tGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAAc > 2:2252600/1‑99 (MQ=255) atcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAAc < 2:516853‑M2/93‑1 (MQ=255) atcaccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAAc < 1:207546‑M2/93‑1 (MQ=255) gACCGGACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac < 2:1149679‑M2/99‑86 (MQ=255) caccGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCg > 1:405069‑M2/5‑99 (MQ=255) aCCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCg > 2:319170/1‑99 (MQ=255) ccGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGt > 2:2729004/1‑99 (MQ=255) ccGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGt > 1:2439901/1‑99 (MQ=255) ggACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 2:950004‑M2/1‑10 (MQ=255) ggACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTaa < 1:864289/99‑1 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag < 1:2315393‑M2/99‑91 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag > 1:1901443‑M2/1‑9 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag < 2:2012619‑M2/99‑91 (MQ=255) gACTGACGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag > 2:690069‑M2/1‑9 (MQ=255) gACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAc < 1:1751521/99‑1 (MQ=255) gACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAc > 2:855629/1‑99 (MQ=255) | AAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAC > NC_000913/4542232‑4542428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |