BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3476003	118 (0.870)	10 (0.080)	10/164	NT	8.2%	coding (438/723 nt)	yheO	putative DNA‑binding transcriptional regulator YheO
*	?	NC_000913	3478963 =	114 (0.910)	10 (0.080)	10/164	NT	8.2%	coding (1645/1806 nt)	kefB	K(+) : H(+) antiporter KefB

Only 100 of 143 total aligned reads displayed.

TTCACTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGAATCGCGATAG  >  NC_000913/3475905‑3476100

ttCACTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGC                                                                                                   >  2:3160300‑M1/1‑99 (MQ=255)

 tCACTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGca                                                                                                  <  2:3415944/99‑1 (MQ=255)

 tCACTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGca                                                                                                  <  1:974324/99‑1 (MQ=255)

   aCTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGcaca                                                                                                >  2:397588/1‑99 (MQ=255)

     ttcttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaa                                                                                              <  1:2912753‑M1/99‑6 (MQ=255)

      tcttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAg                                                                                             >  2:1395949/1‑99 (MQ=255)

      tcttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAg                                                                                             >  1:2947894/1‑99 (MQ=255)

       cttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAgg                                                                                            <  2:1508170/99‑1 (MQ=255)

       cttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAgg                                                                                            >  1:2075478/1‑99 (MQ=255)

        ttcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGt                                                                                           >  2:2060582/1‑99 (MQ=255)

         tcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgca                                                                                          >  2:943583‑M1/1‑90 (MQ=255)

         tcGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTg                                                                                          >  2:2316317/1‑99 (MQ=255)

           gATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgcagt                                                                                        <  1:1009509‑M1/99‑12 (MQ=255)

           gATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCt                                                                                        <  1:2600634/99‑1 (MQ=255)

            aTGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTc                                                                                       >  1:1836458/1‑99 (MQ=255)

            aTGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTc                                                                                       >  2:1607222/1‑99 (MQ=255)

            aTGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTc                                                                                       >  1:1264053/1‑99 (MQ=255)

            aTGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTc                                                                                       >  2:671371/1‑99 (MQ=255)

             tGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCa                                                                                      <  2:3505229/99‑1 (MQ=255)

             tGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCa                                                                                      >  1:2939552/1‑99 (MQ=255)

             tGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCa                                                                                      >  1:1330178/1‑99 (MQ=255)

             tGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCa                                                                                      >  1:1081283/1‑99 (MQ=255)

              ggTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCAt                                                                                     >  1:2050581/1‑99 (MQ=255)

                 gAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAATGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAAt                                                                                  <  1:3252737/99‑1 (MQ=255)

                 gAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAAt                                                                                  <  2:3411697/99‑1 (MQ=255)

                 gAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAAt                                                                                  <  1:1894026/99‑1 (MQ=255)

                 gAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAAt                                                                                  >  1:1292685/1‑99 (MQ=255)

                   aCTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCt                                                                                <  2:3184952/99‑1 (MQ=255)

                   aCTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCt                                                                                <  1:2198379/99‑1 (MQ=255)

                   aCTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCt                                                                                <  2:38949/99‑1 (MQ=255)

                    cTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTg                                                                               >  2:3121702/1‑99 (MQ=255)

                       cAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCga                                                                            <  1:3027342/99‑1 (MQ=255)

                        aGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCgag                                                                           >  1:2780071/1‑99 (MQ=255)

                         gCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCgaga                                                                          >  2:2047233/1‑99 (MQ=255)

                         gCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCgaga                                                                          >  2:180531/1‑99 (MQ=255)

                          cGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGaa                                                                         <  1:2697292/99‑1 (MQ=255)

                           gTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAg                                                                        <  2:2545968/99‑1 (MQ=255)

                            tttGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgcagttgcgctcgctgtgcctg                                                                       >  2:109984‑M1/1‑71 (MQ=255)

                            tttGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAgg                                                                       >  1:629569/1‑99 (MQ=255)

                            tttGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAgg                                                                       <  1:2229435/99‑1 (MQ=255)

                            tttGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAgg                                                                       <  2:437708/99‑1 (MQ=255)

                             ttGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAggg                                                                      <  1:2858891/99‑1 (MQ=255)

                               gggTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGaa                                                                    >  1:3492426/1‑99 (MQ=255)

                                 gTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACa                                                                  >  1:3566319/1‑99 (MQ=255)

                                    aCCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgcagttgcgctcgctgtgcctgatgcggat                                                               <  2:196011‑M1/99‑37 (MQ=255)

                                     ccAGATCTTCAACAGAAGAGGCCAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCaa                                                              >  1:976973/1‑99 (MQ=255)

                                       aGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGa                                                            <  2:279099/99‑1 (MQ=255)

                                       aGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGa                                                            >  2:2357678/1‑99 (MQ=255)

                                       aGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGa                                                            <  1:3065554/99‑1 (MQ=255)

                                       aGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGa                                                            <  2:1789572/99‑1 (MQ=255)

                                        gATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGAt                                                           <  1:1714124/99‑1 (MQ=255)

                                         aTCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGAtt                                                          >  2:1464238/1‑99 (MQ=255)

                                         aTCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGAtt                                                          >  2:3008654/1‑99 (MQ=255)

                                         aTCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGAtt                                                          >  2:3240427/1‑99 (MQ=255)

                                          tCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTc                                                         <  1:457889/99‑1 (MQ=255)

                                           cTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCa                                                        <  1:1051777/99‑1 (MQ=255)

                                           cTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCa                                                        <  1:233107/99‑1 (MQ=255)

                                           cTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCa                                                        >  1:2217665/1‑99 (MQ=255)

                                              cAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCatat                                                     <  2:3009236/99‑1 (MQ=255)

                                                 cAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGa                                                  <  1:1075895/99‑1 (MQ=255)

                                                 cAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGa                                                  <  1:674788/99‑1 (MQ=255)

                                                  agaagaGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGAt                                                 >  1:1528436/1‑99 (MQ=255)

                                                    aagaGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgac                                               >  2:1527832‑M1/1‑47 (MQ=255)

                                                    aagaGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGc                                               <  1:2355948/99‑1 (MQ=255)

                                                     agagGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGca                                              <  2:2571185/99‑1 (MQ=255)

                                                           aaaGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtc                                        <  1:361882‑M1/99‑60 (MQ=255)

                                                           aaaGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCAcagcag                                        <  1:2641064/99‑1 (MQ=255)

                                                            aaGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGa                                       <  1:1623616/99‑1 (MQ=255)

                                                            aaGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGa                                       >  2:1288124/1‑99 (MQ=255)

                                                              gTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGAcc                                     >  1:77189/1‑99 (MQ=255)

                                                                tGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCaa                                   <  2:1608853/99‑1 (MQ=255)

                                                                tGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCaa                                   <  2:242698/99‑1 (MQ=255)

                                                                     cTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTaca                              <  2:2127733/99‑1 (MQ=255)

                                                                        gAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGc                           >  2:1297701/1‑99 (MQ=255)

                                                                        gAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGc                           <  2:1942294/99‑1 (MQ=255)

                                                                         aaCCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCt                          >  2:1886475/1‑99 (MQ=255)

                                                                          aCCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTg                         >  2:3046391/1‑99 (MQ=255)

                                                                          aCCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTg                         <  2:310747/99‑1 (MQ=255)

                                                                            cGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGtt                       <  2:445919/99‑1 (MQ=255)

                                                                                aTCCGGGGTTTCTGGCGGCgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgca                   <  2:18587‑M1/99‑81 (MQ=255)

                                                                                aTCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTcgcg                   >  1:342201/1‑99 (MQ=255)

                                                                                 tCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCgg                  >  1:2844373/1‑99 (MQ=255)

                                                                                   cGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGtt                >  1:3232649/1‑99 (MQ=255)

                                                                                    ggggTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTa               <  2:841645/99‑1 (MQ=255)

                                                                                       gTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGa            <  1:3222208/99‑1 (MQ=255)

                                                                                       gTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGa            >  1:617481/1‑99 (MQ=255)

                                                                                       gTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGa            <  1:1275421/99‑1 (MQ=255)

                                                                                        tttCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGaa           <  2:2432436/99‑1 (MQ=255)

                                                                                        tttCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGaa           <  1:153053/99‑1 (MQ=255)

                                                                                        tttCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGaa           <  2:261175/99‑1 (MQ=255)

                                                                                         ttCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGAAt          <  2:2312941/99‑1 (MQ=255)

                                                                                            tGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGAATcgc       >  2:1930754/1‑99 (MQ=255)

                                                                                              gcggcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttc     >  1:13282‑M1/1‑5 (MQ=255)

                                                                                              gcggcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttc     >  1:1090222‑M1/1‑5 (MQ=255)

                                                                                              gcggcACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGAATCGCGa     >  2:111963/1‑99 (MQ=255)

                                                                                               cggcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttca    <  1:2097842‑M1/99‑96 (MQ=255)

                                                                                               cggcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttca    <  2:3048015‑M1/99‑96 (MQ=255)

                                                                                               cggcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttca    <  2:628755‑M1/99‑96 (MQ=255)

                                                                                               cggcgaaaatgcagttgcgctcgatgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttca    <  2:1167581‑M1/99‑96 (MQ=255)

                                                                                                 gcgaaaatgcagttgcgctcgctgtgcctgatgcggatgcatgccaagcgtgaccagcgtcttgcgccccagctctaacgcactggagaatgtttcacg  >  2:1396188‑M1/1‑2 (MQ=255)

TTCACTTCTTCGATGGTGAACTCCAGCGTTTGGGTAACCAGATCTTCAACAGAAGAGGCAAAGTTGACGCTTGAACCGACATCCGGGGTTTCTGGCGGCACAAAGGTGCTCATAATCTGCGAGAAGGGAACATCAAGATTCATATTGATGCACAGCAGACCAATTACACGCTGTTCGCGGTTACGAATCGCGATAG  >  NC_000913/3475905‑3476100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.