BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3476003	118 (0.870)	10 (0.080)	10/164	NT	8.2%	coding (438/723 nt)	yheO	putative DNA‑binding transcriptional regulator YheO
*	?	NC_000913	3478963 =	114 (0.910)	10 (0.080)	10/164	NT	8.2%	coding (1645/1806 nt)	kefB	K(+) : H(+) antiporter KefB

Only 100 of 145 total aligned reads displayed.

CTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCACGGG  >  NC_000913/3478865‑3479061

 tctTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGa                                                                                                   >  2:210150/1‑99 (MQ=255)

    ttcttcgatggtgaactccagcgtttgggtaaccagatcttcaacagaagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGaaaa                                                                                                <  1:2912753‑M2/5‑1 (MQ=255)

    tCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGaaaa                                                                                                >  2:1893422/1‑99 (MQ=255)

       aGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGc                                                                                             >  2:244576/1‑99 (MQ=255)

       aGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGc                                                                                             >  1:249412/1‑99 (MQ=255)

        tcgatggtgaactccagcgtttgggtaaccagatcttcaacagaagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCa                                                                                            >  2:943583‑M2/91‑99 (MQ=255)

        gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCa                                                                                            >  2:2017333/1‑99 (MQ=255)

        gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCa                                                                                            >  1:1440460/1‑99 (MQ=255)

        gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCa                                                                                            >  1:2219621/1‑99 (MQ=255)

        gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCa                                                                                            >  2:3419585/1‑99 (MQ=255)

        gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCa                                                                                            <  1:107723/99‑1 (MQ=255)

         ttCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAg                                                                                           >  1:1066191/1‑99 (MQ=255)

          tCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGt                                                                                          <  1:1532577/99‑1 (MQ=255)

          gatggtgaactccagcgtttgggtaaccagatcttcaacagaagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCAGt                                                                                          <  1:1009509‑M2/11‑1 (MQ=255)

           cgcgTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGtt                                                                                         <  1:782524/99‑1 (MQ=255)

            gcgTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTg                                                                                        <  1:2455104/99‑1 (MQ=255)

            gcgTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTg                                                                                        <  2:3571534/99‑1 (MQ=255)

             cgTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTgc                                                                                       <  1:2969125/99‑1 (MQ=255)

             cgTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTgc                                                                                       <  1:2712461/99‑1 (MQ=255)

              gTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTgcg                                                                                      >  1:1002996/1‑99 (MQ=255)

               tCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTgcgc                                                                                     <  2:2015496/99‑1 (MQ=255)

               tCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTgcgc                                                                                     >  2:853519/1‑99 (MQ=255)

                 gggCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctc                                                                                   >  2:318903/1‑99 (MQ=255)

                 gggCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctc                                                                                   >  1:656998/1‑99 (MQ=255)

                 gggCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctc                                                                                   >  1:28912/1‑99 (MQ=255)

                  ggCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctcg                                                                                  >  2:811702/1‑99 (MQ=255)

                   gCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctcgc                                                                                 <  2:3556635/99‑1 (MQ=255)

                   gCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctcgc                                                                                 <  1:1671573/99‑1 (MQ=255)

                     ttCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCtg                                                                               <  1:3325587/99‑1 (MQ=255)

                       cccTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCtgtg                                                                             >  1:279088/1‑99 (MQ=255)

                        ccTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGc                                                                            >  1:2422479/1‑99 (MQ=255)

                        ccTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGc                                                                            <  2:3526447/99‑1 (MQ=255)

                          tGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCt                                                                          >  1:2711203/1‑99 (MQ=255)

                          aggCGCGAGAAATCTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCt                                                                          <  2:2133258/98‑1 (MQ=255)

                           tttgggtaaccagatcttcaacagaagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTg                                                                         >  2:109984‑M2/72‑99 (MQ=255)

                            gcgcGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGa                                                                        <  2:1241050/99‑1 (MQ=255)

                             cgcgAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGAt                                                                       <  2:3050239/99‑1 (MQ=255)

                             cgcgAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGAt                                                                       >  1:2314178/1‑99 (MQ=255)

                               cgAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGc                                                                     >  1:1981457/1‑99 (MQ=255)

                                gagaAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCg                                                                    <  2:1257274/99‑1 (MQ=255)

                                gagaAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCg                                                                    <  1:1173721/99‑1 (MQ=255)

                                 agaAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCgg                                                                   >  2:1279336/1‑99 (MQ=255)

                                  gaAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGa                                                                  >  2:2548696/1‑99 (MQ=255)

                                  gaAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGa                                                                  >  1:2672818/1‑99 (MQ=255)

                                   accagatcttcaacagaagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGat                                                                 <  2:196011‑M2/36‑1 (MQ=255)

                                   aaaTTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGat                                                                 >  1:678376/1‑99 (MQ=255)

                                    aaTTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGatg                                                                >  1:912899/1‑99 (MQ=255)

                                    aaTTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGatg                                                                >  1:2004465/1‑99 (MQ=255)

                                      tttGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGatgca                                                              <  2:2222452/99‑1 (MQ=255)

                                      tttGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGatgca                                                              >  1:812339/1‑99 (MQ=255)

                                       ttGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTTCCTGATGCGGatgcat                                                             >  2:3203781/1‑99 (MQ=255)

                                             ggTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAg                                                       >  1:1692092/1‑99 (MQ=255)

                                              gTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGc                                                      >  2:2767385/1‑99 (MQ=255)

                                               tATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCg                                                     <  1:1334648/99‑1 (MQ=255)

                                                aTCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGt                                                    >  2:2885147/1‑99 (MQ=255)

                                                aTCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGt                                                    >  1:1560259/1‑99 (MQ=255)

                                                aTCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGt                                                    <  1:2975738/99‑1 (MQ=255)

                                                 tCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTg                                                   >  2:3025385/1‑99 (MQ=255)

                                                   ggCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGAc                                                 <  1:1984336/99‑1 (MQ=255)

                                                   aagaggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGAc                                                 >  2:1527832‑M2/48‑99 (MQ=255)

                                                    gcatgcatTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGAcc                                                >  2:204165/1‑99 (MQ=255)

                                                      aggcaaagttgacgcttgaaccgacatccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAg                                              <  1:123013‑M2/55‑1 (MQ=255)

                                                       tgcatTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGc                                             >  1:999841/1‑99 (MQ=255)

                                                           ttGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCt                                         >  1:931248/1‑99 (MQ=255)

                                                           ttGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCt                                         >  2:1100873/1‑99 (MQ=255)

                                                            tGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCtt                                        <  2:3037874/99‑1 (MQ=255)

                                                             gggATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTg                                       <  1:932413/99‑1 (MQ=255)

                                                               gATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTgcg                                     >  1:2759144/1‑99 (MQ=255)

                                                                aTGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTgcgc                                    <  1:2039940/99‑1 (MQ=255)

                                                                 tGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGcc                                   <  1:1721195/99‑1 (MQ=255)

                                                                    gCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCa                                >  2:102274/1‑99 (MQ=255)

                                                                    cttgaaccgacatccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCa                                <  2:1462558‑M2/69‑1 (MQ=255)

                                                                        tcGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGctc                            <  1:1842976/99‑1 (MQ=255)

                                                                           cagcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTaa                         <  1:1659273/99‑1 (MQ=255)

                                                                           cagcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTaa                         <  1:3078573/99‑1 (MQ=255)

                                                                            agcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAAc                        <  1:1007312/99‑1 (MQ=255)

                                                                             gcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACg                       >  2:1686384/1‑99 (MQ=255)

                                                                             gcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACg                       >  2:614206/1‑99 (MQ=255)

                                                                             gcaTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACg                       >  2:2390511/1‑99 (MQ=255)

                                                                              caTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGc                      >  1:3374218/1‑99 (MQ=255)

                                                                               atccggggtttctggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCa                     <  2:18587‑M2/80‑1 (MQ=255)

                                                                               aTCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCa                     <  1:501818/99‑1 (MQ=255)

                                                                                tCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCAc                    >  2:2178588/1‑99 (MQ=255)

                                                                                tCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCAc                    <  1:3189718/99‑1 (MQ=255)

                                                                                 ccGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACt                   <  1:408461/99‑1 (MQ=255)

                                                                                    cATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGga                >  2:3094500/1‑99 (MQ=255)

                                                                                     atatCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGgag               >  2:2555472/1‑99 (MQ=255)

                                                                                      tatCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGgaga              >  1:2191832/1‑99 (MQ=255)

                                                                                      tatCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGgaga              >  1:3539255/1‑99 (MQ=255)

                                                                                       atCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGaa             <  2:880422/99‑1 (MQ=255)

                                                                                        tCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAAt            <  2:2793784/99‑1 (MQ=255)

                                                                                        tCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAAt            >  2:1320022/1‑99 (MQ=255)

                                                                                          cAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGt          >  1:1847832/1‑99 (MQ=255)

                                                                                           aGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGtt         >  2:1259448/1‑99 (MQ=255)

                                                                                            ggcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGttt        >  2:1582475‑M2/7‑99 (MQ=255)

                                                                                             gcggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTc       >  1:13282‑M2/6‑99 (MQ=255)

                                                                                              cggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCa      <  2:628755‑M2/95‑1 (MQ=255)

                                                                                              cggcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCa      <  1:2097842‑M2/95‑1 (MQ=255)

                                                                                                gcGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCACg    >  2:1396188‑M2/3‑99 (MQ=255)

                                                                                                  gAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCACggg  >  2:338121/1‑99 (MQ=255)

CTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACCAGCGTCTTGCGCCCCAGCTCTAACGCACTGGAGAATGTTTCACGGG  >  NC_000913/3478865‑3479061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.