New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1555804 =88 (0.820)115 (1.070) 55/276 0.5 49.1% intergenic (‑135/+22) maeA/sra malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22
?NC_000913 = 1556015 150 (1.390)intergenic (‑52/+50) sra/bdm 30S ribosomal subunit protein S22/biofilm‑dependent modulation protein

Only 100 of 115 total aligned reads displayed.

CATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1555939‑1555804
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAA  <  NC_000913/1556015‑1555877
                                                                                                                                                                                                                                                                                   
CATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCG                                                                                                                                         >  2:1106037/1‑140
CATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCG                                                                                                                                         >  2:78005/1‑140
 ATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATATCCATCAGTCCTCAATTTCGC                                                                                                                                        <  1:1511878/140‑1
        TGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCG                                                                                                                                 >  2:800004/1‑140
         GGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTAGCGTATTAGACACATCCAGCGCAGCAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGA                                                                                                                                >  2:439108/1‑140
         GGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGA                                                                                                                                >  1:1060678/1‑140
         GGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGA                                                                                                                                >  2:1452764/1‑140
         GGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGA                                                                                                                                >  2:8844/1‑140
          GACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGAT                                                                                                                               >  2:699963/1‑140
          GACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGAT                                                                                                                               >  1:1152343/1‑140
             TGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTT                                                                                                                            <  1:1304001/140‑1
             TGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTT                                                                                                                            <  1:1762349/140‑1
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAATGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  1:401932/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  1:407305/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  1:221548/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  2:1528791/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  2:1255154/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  2:605701/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  1:739725/1‑140
               GACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGT                                                                                                                          >  1:1696967/1‑140
                   ATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTT                                                                                                                      <  1:78005/140‑1
                         TTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                <  2:1224337/140‑1
                         TTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                <  1:685313/140‑1
                         TTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                <  1:797878/140‑1
                         TTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGCCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                <  1:1491804/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAATGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:401932/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:1020124/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:943781/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:1630758/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:1730086/140‑1
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           >  1:518332/1‑140
                              AACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  2:518332/140‑1
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGAT                                                                                                     >  2:1271925/1‑140
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGAT                                                                                                     >  1:296306/1‑140
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGAT                                                                                                     >  1:1673974/1‑140
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGAT                                                                                                     >  1:6179/1‑140
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTA                                                                                                           <  1:1181009/134‑1
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                <  2:1169050/129‑1
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACT                                                                                                                >  1:1169050/1‑129
                                    CGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAACTATCTACAGGATT                                                                                                    >  1:221491/1‑140
                                      CAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTG                                                                                                   <  2:739725/140‑1
                                        AAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAG                                                                                                 <  2:1593578/140‑1
                                            AGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGT                                                                                             <  2:273729/140‑1
                                                ACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAA                                                                                         >  1:173423/1‑140
                                                ACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAA                                                                                         >  2:787767/1‑140
                                                 CCGAAGGTGACAAATCCATCTTAGTAAATACCCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGATACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAA                                                                                        <  2:173423/140‑1
                                                      GGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTATTCATAACCATCAGTCCTCAATTTCGCTCCGGCGATGTTGTCCTTAAAACTAGCTACAGATTTGAGGGTTTAAATTAAAAa                                                                                  >  2:185359/1‑139
                                                                  AGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAG                                                                       <  2:221548/140‑1
                                                                    CGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     <  1:1452764/140‑1
                                                                    CGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     >  1:1243048/1‑140
                                                                    CGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     <  2:407305/140‑1
                                                                    CGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     >  2:1070433/1‑140
                                                                         TAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTC                                                                >  1:176171/1‑140
                                                                         TAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTC                                                                >  1:1699119/1‑140
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGCACCGTCAGGCACGTCA                                                               <  2:1152343/140‑1
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCA                                                               <  1:1106037/140‑1
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCA                                                               <  1:8844/140‑1
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCA                                                               <  1:1528791/140‑1
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCA                                                               <  1:605701/140‑1
                                                                          AAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCA                                                               <  1:235476/140‑1
                                                                               ACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTC                                                          >  2:492822/1‑140
                                                                                CCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCT                                                         >  1:1548376/1‑140
                                                                                CCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTC                                                          <  2:229118/139‑1
                                                                                CCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTC                                                          >  1:229118/1‑139
                                                                                   AACCGGCAGAAAACGCCCCGCTGAAAAGTAATTGATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     >  2:38814/1‑125
                                                                                   AACCGGCAGAAAACGCCCCGCTGAAAAGTAATTGATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGC                                                                     <  1:38814/125‑1
                                                                                   AACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGG                                                      >  2:1480760/1‑140
                                                                                   AACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGG                                                      >  1:863742/1‑140
                                                                                   AACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGG                                                      >  2:224790/1‑140
                                                                                    ACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGA                                                     <  2:1460112/140‑1
                                                                                    ACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGA                                                     >  1:1357770/1‑140
                                                                                     CCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGAC                                                    >  2:358740/1‑140
                                                                                     CCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGAC                                                    >  2:1827092/1‑140
                                                                                      CGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGTGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACT                                                   <  1:699963/140‑1
                                                                                       GGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTG                                                  <  2:863742/140‑1
                                                                                       GGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTG                                                  <  2:6179/140‑1
                                                                                          AGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGAC                                               <  1:1255154/140‑1
                                                                                              AACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATA                                           <  2:1243048/140‑1
                                                                                               ACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAA                                          <  1:1459450/140‑1
                                                                                               ACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAA                                          <  1:800004/140‑1
                                                                                               ACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAA                                          <  1:224790/140‑1
                                                                                                   CCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACATGATTGAGGAGTTAAAATGAATGAGAACCGTCACGCACGGCATATTCTTGGACTGGAACATAAAATT                                      >  2:103099/1‑140
                                                                                                        TGAAAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAACTATCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAAC                                <  2:221491/140‑1
                                                                                                           AAAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCA                              <  1:358740/140‑1
                                                                                                            AAGTAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAG                             <  1:439108/140‑1
                                                                                                               TAATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGC                          <  2:296306/140‑1
                                                                                                                 ATTCATAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAA                        >  1:1042535/1‑140
                                                                                                                      TAACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAG                   >  1:249010/1‑140
                                                                                                                       AACCATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGT                  >  1:1715752/1‑140
                                                                                                                          CATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTAC               <  1:1070433/140‑1
                                                                                                                           ATCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACC              >  2:1020605/1‑140
                                                                                                                            TCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCG             >  1:1492090/1‑140
                                                                                                                            TCAGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCG             >  1:1466098/1‑140
                                                                                                                              AGTCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAA           >  2:1223735/1‑140
                                                                                                                                TCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGG         >  2:871771/1‑140
                                                                                                                                TCCTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGG         >  2:112327/1‑140
                                                                                                                                  CTCAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTG       <  2:1357770/140‑1
                                                                                                                                    CAATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGAC     >  1:1232073/1‑140
                                                                                                                                     AATTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACA    >  2:1129260/1‑140
                                                                                                                                       TTTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAA  >  1:25653/1‑140
                                                                                                                                                                                                                                                                                   
CATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAATTCATAACCATCAGTCCTCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1555939‑1555804
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCTACGGCGATGTTGTCCTTAAAACTAGCTACAGGATTGAGGAGTTAAAATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAA  <  NC_000913/1556015‑1555877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.