Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,583,062	(AAAT)3→2	pseudogene (25‑28/390 nt)	yrhA →	putative uncharacterized protein YrhA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3583054	3583057	4	79 [0]	[0] 79	yrhA	putative uncharacterized protein YrhA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583058 =	0 (0.000)	77 (1.080)	48/260	0.3	100%	pseudogene (21/390 nt)	yrhA	putative uncharacterized protein YrhA
	?	NC_000913	= 3583053	0 (0.000)					pseudogene (16/390 nt)	yrhA	putative uncharacterized protein YrhA

TTTACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGCACCGCTCAAGGAATCATTTATTGAAAGTATAATCCAAATAGAATTTAATTCTAATTCAACTAATTGCCTGGAGAAGTTATGTAATG  >  NC_000913/3582916‑3583191                                                                                                                                          |                                                                                                                                           tttACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaa                                                                                                                                          <  2:744967‑M2/140‑3 (MQ=255)  ttACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaa                                                                                                                                         >  2:393703‑M2/1‑137 (MQ=255)         cATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATAATGACTAAAACCCaaataaatta                                                                                                                                  <  2:648320‑M2/140‑11 (MQ=255)             cAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataa                                                                                                                              >  2:693347‑M2/1‑126 (MQ=255)                  aCGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatg                                                                                                                         <  2:1062324‑M2/140‑20 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAGAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     <  1:1184818‑M2/140‑24 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     >  2:964425‑M2/1‑117 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     >  1:537231‑M2/1‑117 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     <  1:559861‑M2/140‑24 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     >  1:560169‑M2/1‑117 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     >  2:559861‑M2/1‑117 (MQ=255)                      aTAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatga                                                                                                                     >  2:227496‑M2/1‑117 (MQ=255)                           tAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgat                                                                                                                >  2:768607‑M2/1‑112 (MQ=255)                           tAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgat                                                                                                                >  2:775082‑M2/1‑112 (MQ=255)                              gggAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgat                                                                                                                <  1:376089‑M2/137‑29 (MQ=255)                              gggAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgat                                                                                                                >  2:376089‑M2/1‑109 (MQ=255)                                 aaTATTAGTAGGTGAAATCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagac                                                                                                          >  1:369371‑M2/1‑106 (MQ=255)                                  atatTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagact                                                                                                         >  2:111807‑M2/1‑105 (MQ=255)                                  atatTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagact                                                                                                         <  2:121656‑M2/140‑36 (MQ=255)                                         tagGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatt                                                                                                  <  1:144649‑M2/140‑43 (MQ=255)                                         tagGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatt                                                                                                  <  2:721139‑M2/140‑43 (MQ=255)                                         tagGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatt                                                                                                  <  1:674957‑M2/140‑43 (MQ=255)                                           ggTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttg                                                                                                <  1:644140‑M2/140‑45 (MQ=255)                                           ggTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttg                                                                                                <  2:900348‑M2/140‑45 (MQ=255)                                           ggTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttg                                                                                                <  1:308534‑M2/140‑45 (MQ=255)                                             tGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaa                                                                                              <  1:776334‑M2/140‑47 (MQ=255)                                             tGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaa                                                                                              <  2:143382‑M2/140‑47 (MQ=255)                                              gAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaag                                                                                             <  2:1052299‑M2/140‑48 (MQ=255)                                               aaaGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagc                                                                                            <  2:508677‑M2/140‑49 (MQ=255)                                               aaaGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagc                                                                                            <  2:689822‑M2/140‑49 (MQ=255)                                                aaGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagca                                                                                           >  2:386468‑M2/1‑91 (MQ=255)                                                 aGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcac                                                                                          >  2:1184818‑M2/1‑90 (MQ=255)                                                   cAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccg                                                                                        >  2:308534‑M2/1‑88 (MQ=255)                                                            tCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaa                                                                               <  2:1013506‑M2/140‑62 (MQ=255)                                                            tCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaa                                                                               <  1:151539‑M2/140‑62 (MQ=255)                                                                tGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcat                                                                           <  1:534811‑M2/140‑66 (MQ=255)                                                                      aTTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattg                                                                     >  1:344569‑M2/1‑69 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:1062324‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:121656‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:508677‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:130376‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  2:674957‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:726373‑M2/1‑68 (MQ=255)                                                                       ttCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattga                                                                    >  1:689822‑M2/1‑68 (MQ=255)                                                                        tCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaa                                                                   <  1:467344‑M2/140‑74 (MQ=255)                                                                        tCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaa                                                                   <  2:356948‑M2/140‑74 (MQ=255)                                                                        tCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaa                                                                   <  2:319945‑M2/140‑74 (MQ=255)                                                                           aTCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagt                                                                >  1:660811‑M2/1‑64 (MQ=255)                                                                            tCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagta                                                               <  1:1172696‑M2/140‑78 (MQ=255)                                                                            tCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagta                                                               <  1:1156550‑M2/140‑78 (MQ=255)                                                                               ggCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataa                                                            <  1:1053144‑M2/140‑81 (MQ=255)                                                                                gCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataat                                                           >  1:648320‑M2/1‑59 (MQ=255)                                                                                gCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataat                                                           <  1:473423‑M2/140‑82 (MQ=255)                                                                                          tcctccCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaa                                                 <  2:1230965‑M2/140‑92 (MQ=255)                                                                                                cATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaat                                           <  1:797170‑M2/140‑98 (MQ=255)                                                                                                         tattatGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattca                                  <  1:923082‑M2/140‑107 (MQ=255)                                                                                                              tGGACCACACAAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaa                             >  1:1230965‑M2/1‑29 (MQ=255)                                                                                                                   cacacaAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcc                        <  2:609235‑M2/140‑117 (MQ=255)                                                                                                                   cacacaAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcc                        >  1:94773‑M2/1‑24 (MQ=255)                                                                                                                     cacaAAATTATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaatt                           <  2:243176‑M2/135‑114 (MQ=255)                                                                                                                     cacaAAATTATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaatt                           >  1:243176‑M2/1‑22 (MQ=255)                                                                                                                     cacaAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctg                      <  2:531162‑M2/140‑119 (MQ=255)                                                                                                                     cacaAAATGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctg                      >  2:776334‑M2/1‑22 (MQ=255)                                                                                                                        aaaaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggag                   >  2:473423‑M2/1‑19 (MQ=255)                                                                                                                        aaaaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggag                   >  2:1156550‑M2/1‑19 (MQ=255)                                                                                                                        aaaaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggag                   >  1:900348‑M2/1‑19 (MQ=255)                                                                                                                        aaaaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggag                   >  2:918389‑M2/1‑19 (MQ=255)                                                                                                                        aaaaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggag                   >  1:2502‑M2/1‑19 (MQ=255)                                                                                                                          aaTGATGACTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaa                 <  1:1214873‑M2/140‑124 (MQ=255)                                                                                                                             gatgaCTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagtt              >  1:143382‑M2/1‑14 (MQ=255)                                                                                                                               tgaCTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttat            >  2:1172696‑M2/1‑12 (MQ=255)                                                                                                                                gaCTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatg           <  2:514480‑M2/140‑130 (MQ=255)                                                                                                                                gaCTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatg           <  1:1011962‑M2/140‑130 (MQ=255)                                                                                                                                 aCTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgt          <  2:250260‑M2/140‑131 (MQ=255)                                                                                                                                  cTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgta         <  1:767890‑M2/140‑132 (MQ=255)                                                                                                                                  cTAAAACCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgta         >  1:609235‑M2/1‑9 (MQ=255)                                                                                                                                    aaacCCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgtaat       >  2:797170‑M2/1‑7 (MQ=255)                                                                                                                                      aaCCCaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgtaatga     >  1:1052299‑M2/1‑5 (MQ=255)                                                                                                                                         ccaaataaattaataaaaatgatgaatgatttagactatccatttgaagcaccgctcaaggaatcatttattgaaagtataatccaaatagaatttaattctaattcaactaattgcctggagaagttatgtaatgaagt  >  1:721139‑M2/1‑2 (MQ=255)                                                                                                                                          |                                                                                                                                           TTTACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGCACCGCTCAAGGAATCATTTATTGAAAGTATAATCCAAATAGAATTTAATTCTAATTCAACTAATTGCCTGGAGAAGTTATGTAATG  >  NC_000913/3582916‑3583191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑