BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2481751 =	63 (0.620)	49 (0.490)	28/270	1.8	36.1%	coding (426/1539 nt)	emrY	tripartite efflux pump membrane subunit EmrY
*	?	NC_000913	= 2481901	112 (1.130)	49 (0.490)	28/270	1.8	36.1%	coding (276/1539 nt)	emrY	tripartite efflux pump membrane subunit EmrY

Only 100 of 112 total aligned reads displayed.

ATGTCAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAT  >  NC_000913/2481615‑2481886

aTGTCAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAAt                                                                                                                                      >  1:233136/1‑140 (MQ=255)

aTGTCAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAAt                                                                                                                                      >  2:1579588/1‑140 (MQ=255)

 tGTCAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATg                                                                                                                                     >  2:200519/1‑140 (MQ=255)

    cAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTc                                                                                                                                  >  1:431407/1‑140 (MQ=255)

     aGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCt                                                                                                                                 >  1:1522106/1‑140 (MQ=255)

      ggACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCtt                                                                                                                                >  1:663455/1‑140 (MQ=255)

           aTAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTc                                                                                                                           >  1:1710305/1‑140 (MQ=255)

           aTAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTc                                                                                                                           >  2:347225/1‑140 (MQ=255)

             aaTCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTg                                                                                                                         <  2:451017/140‑1 (MQ=255)

              aTCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTgg                                                                                                                        <  1:1154934/140‑1 (MQ=255)

                 cccATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCgg                                                                                                                     >  1:1244812/1‑140 (MQ=255)

                   cATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGAt                                                                                                                   <  1:641397/140‑1 (MQ=255)

                   aaaaacctctgtgacagtgaaattaccgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGAt                                                                                                                   >  2:341198‑M1/118‑140 (MQ=255)

                     taaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATaa                                                                                                                 <  1:729050‑M1/25‑1 (MQ=255)

                      aGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAAt                                                                                                                >  2:1482629/1‑140 (MQ=255)

                      aGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAAt                                                                                                                >  2:1299527/1‑140 (MQ=255)

                        actctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTc                                                                                                              <  1:919578‑M1/28‑1 (MQ=255)

                          tctgtgacagtgaaattaacgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            >  1:971134‑M1/111‑140 (MQ=255)

                          tctgagacagtaaaattaacgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            >  2:1709958‑M1/111‑140 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  1:379506/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  1:1703056/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  1:347443/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  1:1579588/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  1:663493/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  2:1096303/140‑1 (MQ=255)

                          aCATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCt                                                                                                            <  2:507475/140‑1 (MQ=255)

                            tgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTta                                                                                                          <  1:1046777‑M1/32‑1 (MQ=255)

                            tgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTta                                                                                                          <  1:1469780‑M1/32‑1 (MQ=255)

                             ttGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaa                                                                                                         >  1:1514058/1‑140 (MQ=255)

                             gtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTAGCGGATAATTCCTtaa                                                                                                         <  2:1333385‑M1/33‑1 (MQ=255)

                              tgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTtaat                                                                                                        >  1:1284307‑M1/107‑140 (MQ=255)

                                aTTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGAt                                                                                                                   <  2:792440/127‑1 (MQ=255)

                                aTTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGAt                                                                                                                   >  1:792440/1‑127 (MQ=255)

                                  tgaaaatttaccgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    >  2:663455‑M1/103‑140 (MQ=255)

                                  tAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    <  1:347225/140‑1 (MQ=255)

                                  tAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    <  2:85620/140‑1 (MQ=255)

                                  tAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    <  2:371768/140‑1 (MQ=255)

                                  tAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    <  2:1514058/140‑1 (MQ=255)

                                  tAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    <  2:301750/140‑1 (MQ=255)

                                  agtagaattaccgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataata                                                                                                    >  2:90071‑M1/103‑140 (MQ=255)

                                   aaaaaTATCCACCCCCAGTTAAAGTTATCAAAAATATAACCGCCAAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTC‑TTTTTCTGGCGGATAATTCCTTAATAATaaa                                                                                                  <  2:1502215/140‑1 (MQ=255)

                                    tggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTta                                                                                                          <  2:1490116‑M1/32‑1 (MQ=255)

                                    tggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTta                                                                                                          >  1:1490116‑M1/101‑132 (MQ=255)

                                    tggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATaaa                                                                                                  <  1:90071‑M1/40‑1 (MQ=255)

                                    tggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATaaa                                                                                                  <  1:1709958‑M1/40‑1 (MQ=255)

                                    aaaaTATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATaaa                                                                                                  >  1:1373222/1‑140 (MQ=255)

                                      aaTATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAAct                                                                                                <  2:1244812/140‑1 (MQ=255)

                                          taacgcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCtgt                                                                                            >  2:729050‑M1/95‑140 (MQ=255)

                                          tCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCtgt                                                                                            >  1:710882/1‑140 (MQ=255)

                                          tCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCtgt                                                                                            <  1:903741/140‑1 (MQ=255)

                                            ccgccccagccattaacacctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGa                                                                                          >  2:431407‑M1/93‑140 (MQ=255)

                                            cAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGa                                                                                          <  2:777625/140‑1 (MQ=255)

                                            cAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGa                                                                                          <  1:941720/140‑1 (MQ=255)

                                              gcccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACa                                                                                        >  1:1299527‑M1/91‑140 (MQ=255)

                                              aCCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACa                                                                                        <  1:1423806/140‑1 (MQ=255)

                                                  cAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataat                                                                                                     >  1:1513796/1‑123 (MQ=255)

                                                  cAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTtaataat                                                                                                     <  2:1513796/123‑1 (MQ=255)

                                                       attaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTa                                                                               >  1:463635‑M1/82‑140 (MQ=255)

                                                              tCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGccc                                                                        >  1:1477553/1‑140 (MQ=255)

                                                                tgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTTTGGAGGATAATTAATTAATAATAAATTTTGTGCAACCGGAATTAACgacccat                                                                      <  2:114896‑M1/68‑3 (MQ=255)

                                                                tgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTGCTGGAGGATAATTACTTCATAATAAACTCTGTGAAACTGGAATTAACGGCCCCg                                                                      <  2:27441‑M1/68‑1 (MQ=255)

                                                                  aacgactctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGGTCTTATTTCTGGAGGATAATTCCTTAATAATAAATTTGGGCAAAGTGGAATTAACGGGCCAGcc                                                                    <  2:298852‑M1/70‑1 (MQ=255)

                                                                       ctctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTaa                                                               <  1:322024‑M1/75‑1 (MQ=255)

                                                                       ctctaaaaaatatcagcacatcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTaa                                                               <  1:1383671‑M1/75‑1 (MQ=255)

                                                                            gCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCt                                                          >  1:1419087/1‑140 (MQ=255)

                                                                             cccAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTg                                                         >  1:135081/1‑140 (MQ=255)

                                                                                    ccgcccaacaTATGGGAGCGTTAATCAGGTTCATTGACAATAACCCAAGAGAAATTTTTTTTTTTTCGGGCGAATAATTCTTAAAAAAAAACCTCTGTGACAGGGAAATAACCGCCCCCGCCATTAACCCCTGAACGAct                                                  <  2:1373222/133‑1 (MQ=255)

                                                                                        cccACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTaa                                              >  2:1675315/1‑140 (MQ=255)

                                                                                          atcaagattggtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTaaaa                                            <  1:959280‑M1/94‑1 (MQ=255)

                                                                                          aaaatatGGGAGAAATAATCCCGTTAATTAACAATAATGCAAGAAAAATTTTTTTTTTTTCTGGCGAATAATCCCTAAAAAATAACCTCTGTGAAAGTGAAATAACCGCCCCCGCCATTAACCCCTGAACGACTCTaaaa                                            <  2:1314094/137‑1 (MQ=255)

                                                                                            caTATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTaaaaaa                                          >  2:1284307/1‑140 (MQ=255)

                                                                                            caTATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTaaaaaa                                          >  1:1314094/1‑140 (MQ=255)

                                                                                                  ggAGCAATAATCACGGTCATTGACAATAAGACAAGAGAAAATGTTTTTTTTTCTGGCGTATAATTCCTAAAAAAAAATCTCTGTGAGAGAGAATTAAACGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAg                                    <  2:548063/140‑1 (MQ=255)

                                                                                                    gtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAatatcctgt                                  <  1:126595‑M1/104‑5 (MQ=255)

                                                                                                    gtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGca                                  <  1:1419190‑M1/104‑1 (MQ=255)

                                                                                                    gtcgataggctacacattaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGca                                  <  1:565971‑M1/104‑1 (MQ=255)

                                                                                                      cGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCCTTAACCCCTGAACGACTCTAAAAAATATCAGcaca                                >  2:463635/1‑140 (MQ=255)

                                                                                                       gATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACAt                               >  1:154311/1‑140 (MQ=255)

                                                                                                       aaaaaTCACGTTCATTAACAAAAATGCCAGAGAAATTTTTTTTTTTTCTGGCGAATATTTCCTAAAAAAAAACCTCTGTGACAGTGAAATAAGCGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACAt                               <  2:1710305/137‑1 (MQ=255)

                                                                                                             cACGGTAATTAACAATAATCCCAGACAAATTTTTTTTTTTTCTGGCGAATATTTCTTAAAAAAAAACCTTTGTGACAGTGAAATTACCGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGAt                         <  2:135081/140‑1 (MQ=255)

                                                                                                               cGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTg                       >  1:1535426/1‑140 (MQ=255)

                                                                                                                   attaatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCg                   <  1:97325‑M1/119‑1 (MQ=255)

                                                                                                                     ttatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                 <  1:207389‑M1/121‑1 (MQ=255)

                                                                                                                     ttGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                 >  1:354399/1‑140 (MQ=255)

                                                                                                                     taatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                 <  1:153764‑M1/121‑1 (MQ=255)

                                                                                                                     taatgaagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                 <  1:431460‑M1/121‑1 (MQ=255)

                                                                                                                          aagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCt            <  1:793206‑M1/126‑1 (MQ=255)

                                                                                                                          aagacagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGAACATCAAGATTGGTCGATAGGCt            <  2:1543776‑M1/126‑1 (MQ=255)

                                                                                                                           aTAATGCCAGAAAAATTTTTTTTTTTTCGGGCGAATAATTCCTAAAAAAAAAACTTTGTGAAAGTGAAATAACCGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTa           <  2:818933/140‑1 (MQ=255)

                                                                                                                            tAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac          >  1:1397290/1‑140 (MQ=255)

                                                                                                                             acagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTaca         <  1:647775‑M1/129‑1 (MQ=255)

                                                                                                                             acagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTaca         <  2:368398‑M1/129‑1 (MQ=255)

                                                                                                                             acagcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTaca         <  1:325363‑M1/129‑1 (MQ=255)

                                                                                                                               agcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTAcaca       <  1:62112‑M1/131‑1 (MQ=255)

                                                                                                                               agcgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTAcaca       <  1:1192977‑M1/131‑1 (MQ=255)

                                                                                                                                 cgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAtt     <  1:1632947‑M1/133‑1 (MQ=255)

                                                                                                                                 cgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAtt     <  1:448803‑M1/133‑1 (MQ=255)

                                                                                                                                 cgaaaaaAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAtt     <  2:381041‑M1/133‑1 (MQ=255)

                                                                                                                                    gagCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAt  >  1:1617231/1‑140 (MQ=255)

                                                                                                                                    gagCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAt  >  2:916635/1‑140 (MQ=255)

ATGTCAGGACGATAATCCCCATAGGGACATTGATTAAAAATATCCAACCCCAGCTAAAGTTATCACAAATATAACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAT  >  NC_000913/2481615‑2481886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.