BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2481751 =	63 (0.620)	49 (0.490)	28/270	1.8	36.1%	coding (426/1539 nt)	emrY	tripartite efflux pump membrane subunit EmrY
*	?	NC_000913	= 2481901	112 (1.130)	49 (0.490)	28/270	1.8	36.1%	coding (276/1539 nt)	emrY	tripartite efflux pump membrane subunit EmrY

Only 100 of 161 total aligned reads displayed.

CGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCTCCCAGAAAGC  >  NC_000913/2481769‑2482040

     aaTTCCTAAAAAAAAACCTCTGTGACAGTGAAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGaa                                                                                                                                 <  1:679779/140‑1 (MQ=255)

            taataataaACTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTaaaa                                                                                                                          >  1:1237235/1‑140 (MQ=255)

             aataataaACTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTaaaaa                                                                                                                         >  2:442402/1‑140 (MQ=255)

                aaaaaCCTCTGTGACAGTGAAATTAC‑CGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggat                                                                                                                      >  2:341198‑M2/1‑117 (MQ=255)

                 ataaACTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGAACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAaataat                                                                                                                     <  1:1543776/140‑1 (MQ=255)

                     aCTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattc                                                                                                                 <  1:919578‑M2/140‑29 (MQ=255)

                      ttctgaaaCAGT‑GAATTAAGCGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTaa                                                                                                                <  1:1333385/133‑1 (MQ=255)

                      ctctGAAACAGTGAAATCAA‑CGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTaa                                                                                                                <  1:1675315/140‑1 (MQ=255)

                       tctGTGACAGTGAAATTAA‑CGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattcct                                                                                                               >  1:971134‑M2/1‑110 (MQ=255)

                        ctGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAtt                                                                                                              <  1:916635/140‑1 (MQ=255)

                         tgtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGGCTCTAAAAAATATCAGCACATCAAGCTTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTACAAATAATCTTAATTc                                                                                                             >  2:479185/1‑140 (MQ=255)

                         tgtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattcctta                                                                                                             <  1:1046777‑M2/140‑33 (MQ=255)

                         tgtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattcctta                                                                                                             <  1:1469780‑M2/140‑33 (MQ=255)

                         tgtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatggtcttttttctgacgtataattactta                                                                                                             <  2:554156‑M2/140‑33 (MQ=255)

                         tgtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                                                                                                             >  1:1410943/1‑140 (MQ=255)

                          gtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctagcggataattccttaa                                                                                                            <  2:1333385‑M2/140‑34 (MQ=255)

                          gtgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCg                                                                                                            >  1:1171283/1‑140 (MQ=255)

                           tgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaat                                                                                                           >  1:1284307‑M2/1‑106 (MQ=255)

                           tgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGc                                                                                                           >  2:1617090/1‑140 (MQ=255)

                           tgACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGc                                                                                                           >  1:1534928/1‑140 (MQ=255)

                               tgaaaatttac‑cgcccCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataata                                                                                                       >  2:663455‑M2/8‑102 (MQ=255)

                                gTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTAtt                                                                                                      >  1:1266159/1‑140 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaa                                                                                                     <  1:1709958‑M2/140‑41 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaa                                                                                                     <  1:90071‑M2/140‑41 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattcctta                                                                                                             >  1:1490116‑M2/1‑100 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattcctta                                                                                                             <  2:1490116‑M2/132‑33 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                                                                                                     >  2:1190644/1‑140 (MQ=255)

                                 tGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                                                                                                     >  2:1358792/1‑140 (MQ=255)

                                      aaaa‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTtgt                                                                                                <  1:1126775/138‑1 (MQ=255)

                                       tAA‑CGCCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgt                                                                                               >  2:729050‑M2/1‑94 (MQ=255)

                                            ggCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCaa                                                                                           >  2:223655/1‑140 (MQ=255)

                                                 cGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGc                                                                                      <  2:1539030/140‑1 (MQ=255)

                                                 cGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGc                                                                                      <  1:1190644/140‑1 (MQ=255)

                                                 cGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGc                                                                                      <  2:207389/140‑1 (MQ=255)

                                                           cccTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAgg                                                                            <  2:354399/140‑1 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttttggaggataattaattaataataaattttgtgcaaccggaattaacgacccat                                                                         <  2:114896‑M2/140‑69 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttctttttgctggaggataattacttcataataaactctgtgaaactggaattaacggccccg                                                                         <  2:27441‑M2/140‑69 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGAt                                                                         >  2:1346486/1‑140 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGAt                                                                         >  1:1108476/1‑140 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGAt                                                                         >  2:446350/1‑140 (MQ=255)

                                                              tGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGAt                                                                         >  2:593577/1‑140 (MQ=255)

                                                                aaCGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatggtcttatttctggaggataattccttaataataaatttgggcaaagtggaattaacgggccagcc                                                                       <  2:298852‑M2/140‑71 (MQ=255)

                                                                  cGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCa                                                                     <  2:1632947/140‑1 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaa                                                                  <  1:322024‑M2/140‑76 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaa                                                                  <  1:1383671‑M2/140‑76 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATg                                                                  >  2:763146/1‑140 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATg                                                                  >  2:628497/1‑140 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATg                                                                  >  2:485284/1‑140 (MQ=255)

                                                                     ctctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGC‑AAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATgg                                                                 >  2:1391964/1‑140 (MQ=255)

                                                                       ctAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGc                                                                <  2:1108476/140‑1 (MQ=255)

                                                                        tAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCa                                                               <  1:554156/140‑1 (MQ=255)

                                                                               tatCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTa                                                        >  1:1271124/1‑140 (MQ=255)

                                                                                 tCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTaca                                                      <  2:1434007/140‑1 (MQ=255)

                                                                                    gCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAA‑TGACCGTTAGTAAAAATAATAATTATTTAATAATAATTTCTGTCAACCTGCCATTAACAGCGATGCCAATAGCCTTTGCTAGACCaa                                                  >  2:94221/1‑140 (MQ=255)

                                                                                        aTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACg                                               <  1:593577/140‑1 (MQ=255)

                                                                                         tCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGa                                              <  2:1620402/140‑1 (MQ=255)

                                                                                          cAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAg                                             >  2:1005679/1‑140 (MQ=255)

                                                                                               ttGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAAc                                                <  2:916987/132‑1 (MQ=255)

                                                                                               ttGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGAt                                        >  2:1151091/1‑140 (MQ=255)

                                                                                                tGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATa                                       <  1:1346486/140‑1 (MQ=255)

                                                                                                tGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATa                                       <  1:446350/140‑1 (MQ=255)

                                                                                                tGGTCGATAGGCTACAAATTAATGAAAACAGAAAAAAAaattttttttttttctggcggataattcattaataataacctctgtgacagtgaaattaccgcccccgccattaacccctgaacgactctaaaaaatatcag                                       >  2:959280‑M2/1‑38 (MQ=255)

                                                                                                 ggTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATaa                                      >  1:915982/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagca                                     <  1:1600770‑M2/140‑105 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  1:1337675/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  1:1480129/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  2:450766/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  1:653261/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  1:645684/1‑140 (MQ=255)

                                                                                                  gTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAAc                                     >  1:350989/1‑140 (MQ=255)

                                                                                                      aTAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAg                                 <  1:763146/140‑1 (MQ=255)

                                                                                                           cTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGcc                            <  1:223655/140‑1 (MQ=255)

                                                                                                            tACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCt                           >  2:1073828/1‑140 (MQ=255)

                                                                                                             acacATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCtt                          >  1:270524/1‑140 (MQ=255)

                                                                                                                caTTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGt                       <  1:1151091/140‑1 (MQ=255)

                                                                                                                 aTTAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcg                      <  1:97325‑M2/140‑120 (MQ=255)

                                                                                                                 aTTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTc                      <  1:353414/140‑1 (MQ=255)

                                                                                                                 aTTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTc                      >  2:941216/1‑140 (MQ=255)

                                                                                                                   ttatgAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgat                    <  1:207389‑M2/138‑122 (MQ=255)

                                                                                                                   tAATGAAGACAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgat                    <  1:153764‑M2/140‑122 (MQ=255)

                                                                                                                    aaTGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGt                       >  1:1075030/1‑136 (MQ=255)

                                                                                                                    aaTGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGt                       <  2:1075030/136‑1 (MQ=255)

                                                                                                                    aaTGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGt                   >  1:141559/1‑140 (MQ=255)

                                                                                                                    aaTGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGt                   >  1:1245649/1‑140 (MQ=255)

                                                                                                                        aaGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGAt               >  1:387077/1‑140 (MQ=255)

                                                                                                                           aCAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctaca            <  1:325363‑M2/140‑130 (MQ=255)

                                                                                                                           aCAGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctaca            <  2:368398‑M2/140‑130 (MQ=255)

                                                                                                                           aCAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCt            <  2:1271124/140‑1 (MQ=255)

                                                                                                                           aCAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCt            <  1:1419483/140‑1 (MQ=255)

                                                                                                                           aCAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCt            >  2:1419483/1‑140 (MQ=255)

                                                                                                                             aGCGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacaca          <  1:62112‑M2/140‑132 (MQ=255)

                                                                                                                             aGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGcc                            <  1:551971/122‑1 (MQ=255)

                                                                                                                             aGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGa                >  1:741973/1‑134 (MQ=255)

                                                                                                                               cGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacatt        <  1:1632947‑M2/140‑134 (MQ=255)

                                                                                                                               cGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacatt        <  2:381041‑M2/140‑134 (MQ=255)

                                                                                                                               cGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacatt        <  1:448803‑M2/140‑134 (MQ=255)

                                                                                                                               cGAAAAAaaatgttcttttttctggcggataattccttaataataaactctgtgacagtggaattaacggccccgccattaacccctgaacgactctaaaaaatatcagcacatcaagattggtcgataggctacacatt        <  1:465329‑M2/140‑134 (MQ=255)

                                                                                                                               cGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCTCCCa        >  1:1367593/1‑140 (MQ=255)

                                                                                                                                     aaaaGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCTCCCAGAAAGc  <  2:793206/140‑1 (MQ=255)

                                                                                                                                     aaaaGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCTCCCAGAAAGc  <  1:94221/140‑1 (MQ=255)

CGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAA‑CGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCCAGTAACAGGGATCGCAATGGCATTTGCTACACCAAACGAGGTGATAACCCAGGTGCCTTCGTCTGTTGATGCTCCCAGAAAGC  >  NC_000913/2481769‑2482040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.