| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,279,236 | Δ198 bp | coding (328‑525/1191 nt) | bcr ← | multidrug efflux pump Bcr |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2279236 | 2279433 | 198 | 24 [0] | [0] 23 | bcr | multidrug efflux pump Bcr |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2279235 | 0 (0.000) | 23 (1.170) | 20/264 | 0.1 | 100% | coding (526/1191 nt) | bcr | multidrug efflux pump Bcr |
| ? | NC_000913 | 2279434 = | 0 (0.000) | coding (327/1191 nt) | bcr | multidrug efflux pump Bcr | |||||
TCGGTGCCATCAGCGGTGCAATGGTTGTCACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCC > NC_000913/2279307‑2279564 | agctcaggacacgtttatggcggaacagcgccgcaaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGaaa > 2:35901‑M2/128‑140 (MQ=255)agctcaggacacgtttatggcggaacagcgccgcaaagataccaatagtggtaagaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGaaa > 2:100686‑M2/128‑140 (MQ=255) aggacacgtttatggcggaacagcgccgcaaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCAt < 2:341111‑M2/18‑1 (MQ=255) gaacagcgccgcaaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATc > 1:82902‑M2/106‑124 (MQ=255) gaacagcgccgcaaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATc < 2:82902‑M2/19‑1 (MQ=255) gaacagcgccgcaaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGa > 2:326095‑M2/106‑140 (MQ=255) aaagttaccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCa < 1:57171‑M2/47‑1 (MQ=255) taccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGca < 1:326095‑M2/52‑1 (MQ=255) taccaatagtggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGca < 2:24248‑M2/52‑1 (MQ=255) tggtacgaatgtgaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCACGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCAcc > 1:305047‑M2/80‑140 (MQ=255) gtgaaatggctgactacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGcggcggcgg > 1:237173‑M2/70‑140 (MQ=255) gaaatggctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCa < 1:35901‑M2/73‑1 (MQ=255) gctgacgacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACAcc > 2:102690‑M2/62‑140 (MQ=255) gacgctccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTa > 1:254817‑M2/56‑140 (MQ=255) tccggtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTAccgcc > 1:141305‑M2/51‑140 (MQ=255) gtggtaaggtttctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGc > 1:8795‑M2/47‑140 (MQ=255) tctttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCtt > 1:78611‑M2/36‑140 (MQ=255) tttaatcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTAc > 1:247978‑M2/34‑140 (MQ=255) tcaggaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCg > 2:36119‑M2/29‑140 (MQ=255) gaagaaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGc > 1:163312‑M2/25‑140 (MQ=255) aaaatcattgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTc < 2:254817‑M2/120‑1 (MQ=255) ttgccgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATc > 1:309888‑M2/14‑140 (MQ=255) cgaagccagCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGcc < 2:141305‑M2/131‑1 (MQ=255) | TCGGTGCCATCAGCGGTGCAATGGTTGTCACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCC > NC_000913/2279307‑2279564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |