BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3295729 =	105 (0.840)	155 (1.250)	74/278	0.2	49.5%	coding (336/396 nt)	yraN	UPF0102 family protein YraN
*	?	NC_000913	= 3296254	211 (1.700)	155 (1.250)	74/278	0.2	49.5%	coding (446/591 nt)	diaA	DnaA initiator‑associating factor for replication initiation

Only 100 of 375 total aligned reads displayed.

GTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCAGGA  >  NC_000913/3296115‑3296392

gTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGa                                                                                                                                            >  2:906482/1‑140 (MQ=255)

gTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGa                                                                                                                                            <  1:731779/140‑1 (MQ=255)

    gggCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACtt                                                                                                                                        <  1:1811851/140‑1 (MQ=255)

     ggCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtag                                                                                                                                       <  2:1528324‑M2/140‑6 (MQ=255)

     ggCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGCGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTg                                                                                                                                       >  1:220886/1‑140 (MQ=255)

             gTCATGCGGGAGATGTTTTCTTCGCCATTCCCCCCGGTGCCAACCGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcacc                                                                                                                               >  2:1563205‑M2/1‑127 (MQ=255)

             gTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcacc                                                                                                                               >  1:194817‑M2/1‑127 (MQ=255)

               cATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgg                                                                                                                             >  1:296940‑M2/1‑125 (MQ=255)

                aTGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACACGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTa                                                                                                                            >  1:1735182/1‑140 (MQ=255)

                  gCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaa                                                                                                                          <  1:422522‑M2/140‑19 (MQ=255)

                       agaTGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCcac                                                                                                                     <  2:738290/140‑1 (MQ=255)

                        gaTGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCcaca                                                                                                                    <  1:1109006/140‑1 (MQ=255)

                        gaTGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGAcaca                                                                                                                    >  2:1031864/1‑140 (MQ=255)

                          tGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAgg                                                                                                                  <  1:484577/140‑1 (MQ=255)

                          tGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAgg                                                                                                                  <  1:1554351/140‑1 (MQ=255)

                          tGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAgg                                                                                                                  <  1:1216543/140‑1 (MQ=255)

                          tGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTAAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAgg                                                                                                                  <  2:1730904/140‑1 (MQ=255)

                           gTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttga                                                                                                                 >  2:2047101‑M2/1‑113 (MQ=255)

                           gTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttga                                                                                                                 <  1:531501‑M2/140‑28 (MQ=255)

                           gTATTGTTAGCCATTCCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttga                                                                                                                 >  2:1888411‑M2/1‑113 (MQ=255)

                                gTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtgga                                                                                                            <  1:820834‑M2/140‑33 (MQ=255)

                                  tAGCCATTTCCTCCGGTGGCAACGGCCGGAATTTGGTTAAAAAAGTGAAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccggcaatgaggttgagtggatt                                                                                                          >  1:654783‑M2/1‑106 (MQ=255)

                                  tAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggatt                                                                                                          >  1:927838‑M2/1‑106 (MQ=255)

                                   aGCCATTTCCGCCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggatta                                                                                                         >  1:1147425‑M2/1‑105 (MQ=255)

                                   aGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggatta                                                                                                         >  2:1723772‑M2/1‑105 (MQ=255)

                                   aGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGgaga                                                                                                         >  1:581150/1‑140 (MQ=255)

                                    gCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGAt                                                                                                        >  2:390507/1‑140 (MQ=255)

                                    gCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGAt                                                                                                        >  2:1288441/1‑140 (MQ=255)

                                    gCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCACCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGAt                                                                                                        <  2:1915367/140‑1 (MQ=255)

                                      cATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaagg                                                                                                      <  1:842733‑M2/140‑39 (MQ=255)

                                      cATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATcc                                                                                                      >  1:1271764/1‑140 (MQ=255)

                                       tttccCCCCCGGGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaagga                                                                                                     >  2:987180‑M2/2‑101 (MQ=255)

                                        tttCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGc                                                                                                    >  1:559887/1‑140 (MQ=255)

                                        tttCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGc                                                                                                    >  2:835846/1‑140 (MQ=255)

                                         ttCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatg                                                                                                   >  2:1969563‑M2/1‑99 (MQ=255)

                                         ttCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCa                                                                                                   >  1:677030/1‑140 (MQ=255)

                                          tCCACCCGGGGCAACAGCCGCGATATTGTAAAAGCAGTGGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCAt                                                                                                  <  2:1378033/140‑1 (MQ=255)

                                           ccACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCAtt                                                                                                 >  1:391179/1‑140 (MQ=255)

                                              cccGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCt                                                                                              <  2:25982/140‑1 (MQ=255)

                                              cccGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCt                                                                                              <  1:1054164/140‑1 (MQ=255)

                                                 gTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTc                                                                                                >  1:1092166/1‑135 (MQ=255)

                                                  tGGCAACAGCCGCGATTTTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatg                                                                                          <  1:256817‑M2/140‑51 (MQ=255)

                                                  tGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatg                                                                                          <  1:794670‑M2/140‑51 (MQ=255)

                                                   ggCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatta                                                                                         <  2:869270‑M2/140‑52 (MQ=255)

                                                   ggCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatga                                                                                         <  1:1540069‑M2/140‑52 (MQ=255)

                                                   ggCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatga                                                                                         <  1:1676251‑M2/140‑52 (MQ=255)

                                                   ggCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCa                                                                                         >  1:611261/1‑140 (MQ=255)

                                                    gCAACAGCCGCGATATTGTTAAAGAAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgac                                                                                        >  2:162793‑M2/1‑88 (MQ=255)

                                                      aaCAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCg                                                                                      <  2:1081001/140‑1 (MQ=255)

                                                      aaCAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAAGATGTGGAGATCCGCATTCCTTCGCATCg                                                                                      <  1:2036949/140‑1 (MQ=255)

                                                        cAGCCGCGATTTTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccact                                                                                    >  2:1792729‑M2/1‑84 (MQ=255)

                                                        cAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaattaccact                                                                                    >  1:869270‑M2/1‑84 (MQ=255)

                                                         aGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactc                                                                                   >  1:45817‑M2/1‑83 (MQ=255)

                                                           ccGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATTACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTg                                                                                 >  2:334753/1‑140 (MQ=255)

                                                           ccGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCAGCATTCCTTCGCATCGTAGTg                                                                                 >  1:1755666/1‑140 (MQ=255)

                                                              cgATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataat                                                                              <  2:809422‑M2/140‑63 (MQ=255)

                                                              cgATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTc                                                                              >  2:786314/1‑140 (MQ=255)

                                                                atatTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataatta                                                                            >  1:991710‑M2/1‑76 (MQ=255)

                                                                atatTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGc                                                                            >  1:1377692/1‑140 (MQ=255)

                                                                 tatTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCa                                                                           <  1:1890680/140‑1 (MQ=255)

                                                                            cAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggat                                                                >  1:1405828‑M2/1‑64 (MQ=255)

                                                                                tGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCata                                                            >  1:1019129/1‑140 (MQ=255)

                                                                                tGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCata                                                            >  1:1845084/1‑140 (MQ=255)

                                                                                      cgccgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGa                                                      >  2:1126644/1‑140 (MQ=255)

                                                                                       gccgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTGGTGCTCGCATTCAGGAAATGCATATGCTGAc                                                     <  2:1271764/140‑1 (MQ=255)

                                                                                       gccgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGAc                                                     <  2:417699/140‑1 (MQ=255)

                                                                                       gccgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGAc                                                     >  2:313545/1‑140 (MQ=255)

                                                                                        ccgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaaga                                                    >  1:208029‑M2/1‑52 (MQ=255)

                                                                                         cgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaa                                                   <  2:1102869‑M2/140‑90 (MQ=255)

                                                                                         cgTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACgg                                                   >  1:312035/1‑140 (MQ=255)

                                                                                              cgcgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaat                                              >  2:1584970‑M2/1‑46 (MQ=255)

                                                                                                cgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaatta                                            >  2:1218043‑M2/1‑44 (MQ=255)

                                                                                                cgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTg                                            <  2:67415/140‑1 (MQ=255)

                                                                                                cgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTg                                            <  2:936329/140‑1 (MQ=255)

                                                                                                cgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTg                                            <  1:1303541/140‑1 (MQ=255)

                                                                                                cgTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTg                                            <  2:2093151/140‑1 (MQ=255)

                                                                                                    atatGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCtg                                        >  1:157710/1‑140 (MQ=255)

                                                                                                    atatGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCAGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCtg                                        <  2:1755666/140‑1 (MQ=255)

                                                                                                     tatGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCtgt                                       <  1:2054/140‑1 (MQ=255)

                                                                                                        gACCATTGTGGCATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgc                                    >  1:125474‑M2/1‑36 (MQ=255)

                                                                                                             ttGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTg                               >  1:893620/1‑140 (MQ=255)

                                                                                                               gtgGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGAt                             <  2:1323854/140‑1 (MQ=255)

                                                                                                                   cATTGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgcttcactgaaag                         <  2:489689‑M2/140‑116 (MQ=255)

                                                                                                                   cATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGAt                         >  2:540569/1‑140 (MQ=255)

                                                                                                                    aTTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATa                        >  2:452218/1‑140 (MQ=255)

                                                                                                                     ttGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgc                                    >  2:1483098‑M2/1‑23 (MQ=255)

                                                                                                                     ttGACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgc                                    <  1:1483098‑M2/127‑105 (MQ=255)

                                                                                                                       gACCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgcttcactgaaagcatt                     >  2:626925‑M2/1‑21 (MQ=255)

                                                                                                                        aCCGGCTATGACGGCGGCGAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgcttcactgaaagcattc                    <  2:1168255‑M2/140‑121 (MQ=255)

                                                                                                                        aCCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAacac                    >  2:597860/1‑140 (MQ=255)

                                                                                                                        aCCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAacac                    >  1:1985346/1‑140 (MQ=255)

                                                                                                                           ggCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCt                 <  2:1415789/140‑1 (MQ=255)

                                                                                                                                tGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTcc            <  2:611261/140‑1 (MQ=255)

                                                                                                                                  aCGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCt          <  1:940273/140‑1 (MQ=255)

                                                                                                                                  aCGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCt          >  2:2012188/1‑140 (MQ=255)

                                                                                                                                      cggcgAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgcttcactgaaagcattcaaactcaaattgcg      <  2:232213‑M2/140‑135 (MQ=255)

                                                                                                                                       ggcgAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCa     >  1:351697/1‑140 (MQ=255)

                                                                                                                                       ggcgAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCCGATCGATAACACGCTTTTCCCTCACCa     >  2:1681565/1‑140 (MQ=255)

                                                                                                                                        gcgAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCAg    >  2:1435960/1‑140 (MQ=255)

                                                                                                                                          gAggtagccttcaccgggaatgaggttgagtggattaaggatgcctttaatgaccactcataattaaggtttaaggattagcgtgcaagaaagaattaaagcttgcttcactgaaagcattcaaactcaaattgcggcgg  <  2:573517‑M2/140‑139 (MQ=255)

GTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCAGGA  >  NC_000913/3296115‑3296392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.