| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3693271 | 328 (0.620) | 17 (0.040) | 8/94 | NT | 5.5% | intergenic (+18/+69) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small |
| ? | CP009273 | = 3693281 | 313 (0.710) | intergenic (+28/+59) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small | |||||
Only 100 of 180 total aligned reads displayed.
CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3693196‑3693271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgcagGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG < CP009273/3693281‑3693215 CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:37750514/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:27252897/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:361916/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:7002738/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:37226892/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:14989278/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:25592909/1‑68 CAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAG > 1:18884691/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:39748017/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:6078259/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:21152792/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:37299035/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:3769079/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:9543854/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:1010967/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:26302374/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:26689592/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:42665636/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:35689254/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:29918363/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:30040763/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:13647522/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:33414121/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:34381398/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:10819129/1‑68 ATAAACCGTACGTTCGCCTGAAGGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAAGGAAAAAGGC < 1:19283452/66‑1 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:27547262/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:35375318/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:25490119/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:25371241/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:34022529/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:23635222/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:3818233/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:17553338/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:43340473/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:42039375/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:885238/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGC < 1:27587175/66‑1 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCACAGTAAGAACGAAAAAGGCC > 1:42720242/1‑67 ATAAACCGTACGTTCGCCTAAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:17878543/1‑67 TAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCG < 1:4469381/67‑1 AAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCA > 1:28575999/1‑68 AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG > 1:40787901/1‑68 ACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCgga > 1:22673386/1‑65 CGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGcgt > 1:29267047/1‑65 GTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGGCGGGGAACACTTGGGCGTTTTTCGTTCTTAC > 1:12922908/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:6233846/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:17042081/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:16990233/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:20673452/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:39344856/1‑68 AGTAAGAACGAAAAAGGCCGCAGGGGGGCAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGC > 1:13528333/1‑67 AGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCA > 1:7514066/1‑68 AACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCCCCCAG > 1:30140953/1‑67 CGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTC > 1:29026335/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:35283297/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:38613665/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:27894069/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:19504100/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:19999864/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:2271471/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:22733004/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:23873291/1‑67 CCGCAGGGGGGAAACTCTGCGGCGTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:34322772/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:5078528/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:4409328/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:15816683/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:15935046/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:41956887/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:5614300/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:38069504/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:24319223/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:24887321/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:834396/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:36658629/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:36507124/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:2618253/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:33510961/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:11958609/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:33077870/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:32786652/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:31104676/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:19383382/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:2227494/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:850562/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:6115360/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCCTTC > 1:25018221/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:9727025/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:4146637/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:2320037/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGG < 1:28759523/67‑1 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGG < 1:27327961/67‑1 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGG < 1:21637530/67‑1 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:4532500/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:39280641/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:37715949/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:35098503/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:25866086/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:20256077/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:10173259/1‑68 CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3693196‑3693271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgcagGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG < CP009273/3693281‑3693215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |