| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3693271 | 328 (0.620) | 17 (0.040) | 8/94 | NT | 5.5% | intergenic (+18/+69) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small |
| ? | CP009273 | = 3693281 | 313 (0.710) | intergenic (+28/+59) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small | |||||
Only 100 of 675 total aligned reads displayed.
AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACAC > CP009273/3693204‑3693338 | aaCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG > 1:40787901‑M1/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:32669294/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:20191383/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:42853043/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:36022633/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:28560456/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:2917945/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:32371757/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:40484567/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag < 1:21380458/68‑1 (MQ=255) cGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGt > 1:15404755/1‑68 (MQ=255) cGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGt > 1:43101704/1‑68 (MQ=255) aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGttt > 1:23248687/1‑67 (MQ=255) cGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc < 1:3397515/68‑1 (MQ=255) cGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTc > 1:11061282/1‑67 (MQ=255) cGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTc > 1:20386820/1‑67 (MQ=255) cGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTc > 1:37332674/1‑67 (MQ=255) cGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTc > 1:36806730/1‑67 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGtttac > 1:21894473/1‑65 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc > 1:37205973/1‑67 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc > 1:16021826/1‑67 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc > 1:8063288/1‑67 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc > 1:2807296/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:11404453/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:19925787/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:35391695/1‑67 (MQ=255) tCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccccc < 1:35048244/68‑1 (MQ=255) cGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCc > 1:39871046‑M2/1‑67 (MQ=255) cGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCc > 1:8574194‑M2/1‑67 (MQ=255) gCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCct > 1:25752219‑M2/1‑66 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:32888470‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:41451923‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:24887321‑M2/1‑62 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg < 1:31104676‑M2/66‑7 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg < 1:6115360‑M2/66‑7 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg < 1:43428832‑M2/66‑7 (MQ=255) ggcggcGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTg > 1:5140974/1‑68 (MQ=255) ggcggcGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTg > 1:27780682/1‑68 (MQ=255) ggcgACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGt < 1:31397571/67‑1 (MQ=255) gACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcg > 1:23832330‑M2/1‑52 (MQ=255) cggggtgCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgtt > 1:19391693‑M2/3‑50 (MQ=255) cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGgc > 1:14745703/1‑68 (MQ=255) gTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgttctta > 1:3952062‑M2/1‑46 (MQ=255) gCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAAt > 1:13113359/1‑68 (MQ=255) ccTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAAtt > 1:13322355/1‑68 (MQ=255) ttACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgttcttactgcgg > 1:42071550‑M2/1‑41 (MQ=255) ttACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgttcttactgcgg > 1:16990233‑M2/1‑41 (MQ=255) aCCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa < 1:13670/68‑1 (MQ=255) aCCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa < 1:41198413/68‑1 (MQ=255) cccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAt > 1:22277078/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGgggggaagctctgcggccgttttcgttcttactgcggggtt > 1:23002556‑M1/1‑27 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:36454045/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:24434316/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:3009040/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:33558887/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:7272964/1‑68 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:6238282/1‑67 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:10487965/1‑67 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:18004909/1‑67 (MQ=255) gTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGc > 1:4600483/1‑68 (MQ=18) aGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGc < 1:33292262/68‑1 (MQ=255) caaCGAAAAAGGCCGCAGAGTATCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:14095894/67‑1 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:31749239/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:9165010/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:1846394/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:4184248/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:20806123/1‑65 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:38569089/66‑1 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:34529451/66‑1 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:25169388/66‑1 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:27535929/66‑1 (MQ=255) cGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTg > 1:37663187/1‑67 (MQ=255) gAAAAAGGCCTCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAATTTGCCATTACGGCAGCCTGAc < 1:30493900/68‑1 (MQ=255) aaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGCCGc > 1:11706111/1‑67 (MQ=255) aaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGc > 1:9700403/1‑67 (MQ=255) aaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGc > 1:17465835/1‑67 (MQ=255) aaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGCCGccc > 1:1579756/1‑68 (MQ=255) ggCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGc > 1:24294042/1‑68 (MQ=255) ggCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGc > 1:22669071/1‑68 (MQ=255) gCCGCAGAGTTTCCCCCCTGCGGCGTGGTCCGGGCGCAAATTGCCTTTACGGCAGCCTGACGCCCGCa > 1:261518/1‑68 (MQ=37) gCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa > 1:26957799/1‑68 (MQ=255) gCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa > 1:25444066/1‑68 (MQ=255) gCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa > 1:23683264/1‑68 (MQ=255) ccGCAGgggggaaactctgcggcgtttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:34322772‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:29368241‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:38069504‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:5614300‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:7678368‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:834396‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:26431974‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgt < 1:11958609‑M1/66‑61 (MQ=255) cGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATg < 1:28865260/68‑1 (MQ=255) agagTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTAGGGCAGCCTGACGCCCGCATGac < 1:19214697/67‑1 (MQ=255) agagTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac < 1:12777042/67‑1 (MQ=255) agagTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac < 1:6726484/67‑1 (MQ=255) aGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcagg < 1:37790120‑M1/67‑66 (MQ=255) ggggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcaggcg > 1:4480647‑M1/1‑1 (MQ=255) ggggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcaggcg > 1:39280641‑M1/1‑1 (MQ=255) ggggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcaggcg > 1:10173259‑M1/1‑1 (MQ=255) gagTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGacac > 1:16520521/1‑68 (MQ=255) | AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACAC > CP009273/3693204‑3693338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |