BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3999175 =	475 (0.900)	27 (0.060)	8/96	NT	6.2%	intergenic (+84/‑49)	pldA/recQ	outer membrane phospholipase A/ATP‑dependent DNA helicase
*	?	CP009273	3999197 =	411 (0.910)	27 (0.060)	8/96	NT	6.2%	intergenic (+106/‑27)	pldA/recQ	outer membrane phospholipase A/ATP‑dependent DNA helicase

Only 100 of 133 total aligned reads displayed.

AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3999249‑3999175

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA  >  CP009273/3999197‑3999263

AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA                                                                            >  1:40432348/1‑68

 GATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA                                                                            >  1:13669308/1‑67

  ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:3807257/1‑68

  ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:39341754/1‑68

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:12989075/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:35806341/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:30402006/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:3718299/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:38272347/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:13494772/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:13346806/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:394267/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:12327757/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:26436283/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:25030906/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:6667880/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:11470764/1‑67

   TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC                                                                          >  1:720005/1‑67

     CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG                                                                         >  1:24304792/1‑66

      AACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATTAAAACAGGCGCTATTTTCAGCGCCT                                                                      <  1:27499025/68‑1

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:22917419/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:28594492/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:3667182/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:40394672/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:41004910/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:42865414/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:8050633/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:9026790/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:17336791/1‑67

       ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT                                                                      >  1:10923921/1‑67

        CACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGT                                                                    <  1:4891096/68‑1

                       CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA                                                      <  1:30413491/67‑1

                       CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA                                                      <  1:7942322/67‑1

                       CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA                                                      <  1:17581952/67‑1

                        ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT                                                    <  1:36983069/68‑1

                        ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT                                                    <  1:25906691/68‑1

                        ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT                                                    <  1:7741272/68‑1

                           TTCCCCCCGTTTGCCTGAAATAAAACCAGGCGCTATTATCAGCGCCTGTTTTTATTTCAGGCAATCGG                                                 <  1:23562572/68‑1

                           TTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGG                                                 <  1:20542628/68‑1

                            TCACCCCGATTGCCTGAAATAAACACCGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG                                                <  1:27816272/68‑1

                            TCACCCCGATTGCCTGAAATAAAAACCCGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG                                                <  1:35506742/68‑1

                            TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG                                                <  1:12766420/68‑1

                            TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG                                                <  1:39991004/68‑1

                            TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCACCGCCTGTTTTTATTTCAGGCAATCGGG                                                <  1:19220089/68‑1

                             CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG                                               <  1:25770215/68‑1

                             CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG                                               <  1:23484315/68‑1

                                 CCGATTGCCGGAAATAACAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAA                                           <  1:32608498/68‑1

                                                    ACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG                        <  1:11994916/68‑1

                                                     ccGGCGCAATTTTCACCGCCTGTTTTAATTTCAGGCAAGCGGGGTGAATGTGGCGCAGGCGGAAGTGT                       <  1:34704206/66‑1

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:2746972/1‑68

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:24914772/1‑68

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:41569510/1‑68

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:167008/1‑68

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:13005061/1‑68

                                                                    GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG        >  1:12206626/1‑68

                                                                      GCCTGTTTTTATTTCAGGCATTCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:19491040/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:4201112/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:12952420/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:39557489/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:16557882/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:39346302/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:40718383/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:41470581/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:8788330/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:10809136/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:42166782/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:5798222/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:6259497/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:6672541/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:6886537/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:38632837/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:20577703/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:21721376/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:21790860/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:24957058/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:19023876/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:25468082/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:26022183/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:17488291/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:28434617/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:10078435/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:31171941/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:35129189/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:17044295/1‑68

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:37405217/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGCCCGGA      <  1:15059745/68‑1

                                                                      GCCTGTTTTTATTTCAGGCAATCGGGGGGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      <  1:31876154/68‑1

                                                                       CCTATTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA      >  1:20539128/1‑67

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:32376899/68‑1

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:41161213/68‑1

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:14738585/68‑1

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:25776164/68‑1

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:37332284/68‑1

                                                                        CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAG     <  1:10240571/67‑1

                                                                        CTGTTTTTATTACAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC    <  1:6787476/68‑1

                                                                         TGTTTTTATTTCAGGCAATCGGGGTGAATTTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT   <  1:15336896/68‑1

                                                                         TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT   <  1:11702135/68‑1

                                                                          GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA  <  1:5073520/68‑1

                                                                          GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA  <  1:8876447/68‑1

                                                                          GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA  <  1:29070040/68‑1

AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3999249‑3999175

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA  >  CP009273/3999197‑3999263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.