| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 475 (0.900) | 27 (0.060) | 8/96 | NT | 6.2% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 411 (0.910) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 639 total aligned reads displayed.
TGGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999108‑3999241 | tagctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaac < 1:8876447‑M1/1‑1 (MQ=255)tagctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaac < 1:3573173‑M1/1‑1 (MQ=255) agctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCa < 1:11702135‑M1/2‑1 (MQ=255) agctccggactccagattcaacacttccgcctgcgccaaattcaccccgattgcctgaaataaaaaCa < 1:15336896‑M1/2‑1 (MQ=255) gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:25776164‑M1/3‑1 (MQ=255) gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:41161213‑M1/3‑1 (MQ=255) gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:37332284‑M1/3‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattccccccgattgcctgaaataaaaaCAGgc < 1:31876154‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:10078435‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:24957058‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:17488291‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc > 1:31171941‑M1/64‑68 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:39346302‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:40718383‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:5798222‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:6672541‑M1/5‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAgg < 1:17157686/67‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAgg < 1:29544780/67‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:32379446/68‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:22244821/68‑1 (MQ=255) aaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcg > 1:17885334/1‑68 (MQ=255) cggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgcgc > 1:41569510‑M1/62‑68 (MQ=255) cggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgcgc > 1:2746972‑M1/62‑68 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:2124308/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:15552716/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:20593749/68‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAAt > 1:38479724/1‑68 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAAt > 1:3065013/1‑68 (MQ=255) ccAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATa > 1:36443400/1‑67 (MQ=255) cAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgc < 1:23454880/68‑1 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:24202383/1‑65 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:21684923/1‑65 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGTAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:10273614/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:8482865/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt > 1:3323987/1‑68 (MQ=255) cacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGt < 1:11994916‑M1/23‑1 (MQ=255) cAGGATTACCCTCTCAGATACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:10827624/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:32601012/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:18929987/68‑1 (MQ=255) ggATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtttt > 1:11070494/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:28867946/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:13506741/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:14988576/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:15881741/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:39536664/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:2914605/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:22525857/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:6791961/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:23345989/1‑68 (MQ=255) aTTACCCTCTCAGAGACAAAAAGCATTGCAGATTCACGCGCACGCGCTGAAAATAGCTCCTGGTTTTa > 1:34477929/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:37670393/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:39190526/1‑68 (MQ=255) ctctCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAg > 1:12283903/1‑68 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:43538030/68‑1 (MQ=255) cAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:27187087/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:43318261/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:19784598/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:38126683/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:33527512/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:33780871/1‑67 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:34994324/1‑68 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:13153174/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:26563986/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:1145675/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg < 1:42543380/67‑1 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:1062892/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:26093970/1‑68 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:7029887/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:26741037/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:7319035/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:43020230/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:34121738/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:40287731/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:4595513/67‑1 (MQ=255) tAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGt > 1:32099432/1‑68 (MQ=255) aaaaTCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGtt < 1:27045102/68‑2 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGGAATCGGGGTGa < 1:13745736‑M1/47‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:12766420‑M1/47‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:39991004‑M1/47‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:5539759/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:14664948/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:6064447/1‑68 (MQ=255) cATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgt > 1:20385327/1‑68 (MQ=255) attgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgt < 1:3874421‑M1/51‑1 (MQ=255) attgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTATTTTTATTTCAGGCAATCGGGGTGAAtgt < 1:23012421‑M1/51‑1 (MQ=255) tgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgtg < 1:7942322‑M1/52‑1 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:16720050/1‑67 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGGATGTGGCGCa > 1:20114375/1‑68 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:42124042/1‑68 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:36826819/1‑68 (MQ=255) tttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:35396945/38‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTCTTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:18569720/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:28098755/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:18228311/68‑1 (MQ=255) ctcGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCgg > 1:25328965/1‑68 (MQ=255) tcGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGa < 1:30288490/68‑1 (MQ=255) tcGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGa < 1:14395473/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGTCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:3698820/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:19440109/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgt < 1:5140526/67‑1 (MQ=255) | TGGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999108‑3999241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |