| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 574 (1.090) | 33 (0.070) | 11/94 | NT | 5.9% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 567 (1.280) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 169 total aligned reads displayed.
TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046719‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAA > 1:9222570/1‑68TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAA > 1:12383818/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:17707306/68‑1 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:30410752/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:4131775/68‑1 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:37538187/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:33004505/68‑1 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:30992981/68‑1 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:22040571/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:13825223/68‑1 CTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:39481669/1‑68 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:6253987/1‑67 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:17646455/1‑67 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:7178634/1‑68 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:42692073/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:18664936/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:43061319/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:3630784/68‑1 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCGGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:35334292/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:24351748/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:22111371/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:37295148/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:10787864/1‑66 ATATCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:37114198/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:8786896/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:15819260/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:2547499/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:20818090/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:24149773/1‑68 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:37737488/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:18293363/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:26184083/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:30221827/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:2475010/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:27383080/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:309865/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:4055917/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:31938195/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:20864578/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:37081259/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:19554820/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:36761590/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:8307632/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAAGGCGCTT < 1:34097822/68‑1 TATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGT < 1:33488336/68‑1 GCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGC < 1:13809700/68‑1 AGTTCTCTCGGGTGCTTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:13712428/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGGGGCATTC > 1:39611989/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCGATTC > 1:8567093/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:17257247/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:35818551/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:42151536/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:32380024/1‑68 TCTCTCGGGTGATTTAAATAGTGAATGGCGGTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACT > 1:4035482/1‑68 TCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTTAACGAAGCGCCATTCACT > 1:24652804/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTGACTAT > 1:38350574/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:28819338/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:17387795/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:10013137/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:24998807/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:39180236/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:29482096/1‑68 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTAGTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:21094701/1‑67 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:39530735/1‑67 TTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACC < 1:17914092/68‑1 TTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACC < 1:17865194/68‑1 TTTAAATAGTGAAGGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACC < 1:31348396/68‑1 TTTAAATAGCGAATGGCGCTTTCGTTTTCAACATTGTAAACGAAGCGCCATTCACTATTTAAATCACC < 1:17914111/68‑1 ATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGA > 1:5776449/1‑68 AGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGA > 1:24533481/1‑68 AGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGA < 1:12863546/68‑1 GAATGGCGCTTTCGTTTTCTACTTTGTAAACGACGCGCCATTCACTTGTTAAATCACCCGAGAGA > 1:37924019/1‑65 ATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTG < 1:13444924/67‑1 ATGCCGCTTTCGTTTTCAACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTG < 1:28081075/67‑1 TGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCTGAGAGAACTGC < 1:18134117/67‑1 TGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACT > 1:26436408/1‑65 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCTCTATTTAAATCACCCGAGAGAACTGCT > 1:1397905/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCCCCCGAGAGAACTGCT > 1:8931826/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGTGAGAACTGCT > 1:14996809/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:41529022/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:8165158/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:9813833/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:36307559/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:10378072/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:16703864/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:203714/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:24341743/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:30772472/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:34597659/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:35239813/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGAAATTCTCTATTTAAATCACCCGAGAGAACTGCT > 1:7857018/1‑67 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:28839603/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:257810/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:25568797/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:33991588/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:10777463/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:39198616/1‑68 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA < 1:10081145/67‑1 TTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC > 1:17234997/1‑68 TTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC > 1:1518744/1‑68 TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046719‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |