| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 574 (1.090) | 33 (0.070) | 11/94 | NT | 5.9% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 567 (1.280) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 961 total aligned reads displayed.
TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 | tACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:8331279‑M1/68‑1 (MQ=255) aCCTATCTGCGCCATAAAGCGCGGATGCAGCAGTTCTCTCCGGTCATTTAAAAAGAGAAAGGCGCTT > 1:13504903‑M1/1‑67 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:26489142/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:37597220/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:40495576/1‑68 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:20633185/68‑1 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg > 1:34037157/1‑68 (MQ=255) cTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGt < 1:23000147/68‑1 (MQ=255) cTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGt > 1:4637457/1‑68 (MQ=255) tATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGtt < 1:35545925/68‑1 (MQ=255) tATCAGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGtt < 1:19024336/68‑1 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:38526415/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:9432921/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:28593611/1‑67 (MQ=255) tGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACa > 1:33156615/1‑68 (MQ=255) tGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACa > 1:18636249/1‑68 (MQ=255) aaaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaa > 1:3965413/1‑68 (MQ=255) aaaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaa > 1:6927426/1‑68 (MQ=255) aaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaaa < 1:15558517/68‑1 (MQ=255) aaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGa < 1:42873818/66‑1 (MQ=255) aGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaaaa < 1:24277898/68‑1 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:257810‑M2/1‑63 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:25568797‑M2/1‑63 (MQ=255) gcagcaGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgc > 1:7891004‑M2/1‑62 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:31459566/1‑68 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAAAGAAAGCGCCATc > 1:26104974/1‑68 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:9718440/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:40160021/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCa > 1:13780583/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcact > 1:24533481‑M2/1‑54 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:33539464/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:29028548/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:17025109/1‑68 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:30672311/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:14179368/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:14412685/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:3820333/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:10806995/68‑1 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattctctat > 1:41473268‑M1/1‑31 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:39354114/67‑1 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:37836484/1‑67 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:19702320/1‑67 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:5400052/68‑1 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactattta > 1:17387795‑M1/1‑28 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactattta > 1:10013137‑M1/1‑28 (MQ=255) gggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTga < 1:34500572/68‑1 (MQ=255) gggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTga < 1:15288739/68‑1 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcagtatttaaa > 1:37265995‑M1/1‑26 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAATGTTGAAAACGAaagcgccattcgctatttaaa < 1:17914111‑M2/68‑22 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:16777430/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:21986902/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:2021747/1‑68 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTtcgttttctagtttgtaaacgaagcgccattcactatttaaa > 1:21094701‑M1/1‑25 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:36467617/68‑1 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag < 1:27921553/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:12660962/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:25141653/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:36810182/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:23705704/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:16426351/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:20781432/67‑1 (MQ=255) gATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAAc > 1:30241186/1‑68 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACaa < 1:41722698/68‑1 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACaa < 1:27373682/68‑1 (MQ=255) ttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAg < 1:11276788/68‑1 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:1042848/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:24922047/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:38951243/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:21302510/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:8961789/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg < 1:29525128/68‑1 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:31060911/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:35214453/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:32152367/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:22466969/1‑67 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:32435874/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:28284892/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:12992710/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:42502434/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:19422537/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:2705307/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:21741355/1‑66 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccgagagaact > 1:35818551‑M2/1‑32 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa < 1:7598745/68‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa < 1:38739656/68‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa > 1:12126595/1‑68 (MQ=255) tGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc < 1:8734581/68‑1 (MQ=255) ggCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgtgagaactgct > 1:14996809‑M1/1‑7 (MQ=255) ggCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgct > 1:36260615‑M1/1‑7 (MQ=255) gcgcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgc > 1:34844401‑M1/1‑6 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:4967191/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:4348428/1‑66 (MQ=255) cgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:15884498/1‑65 (MQ=255) gcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:5762397/1‑68 (MQ=255) cTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgcat > 1:17813602‑M1/1‑3 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg > 1:6125777/1‑67 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:42134320/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:41017237/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:18128622/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg > 1:10279950/1‑67 (MQ=255) | TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |