| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 574 (1.090) | 33 (0.070) | 11/94 | NT | 5.9% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 567 (1.280) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 756 total aligned reads displayed.
GCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTAT > CP009273/4046748‑4046882 | gcgGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGa > 1:42853555/1‑68 (MQ=255) ggATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaa > 1:1518744‑M2/1‑66 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:5881804‑M2/1‑63 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:33991588‑M2/1‑63 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:34520257‑M2/1‑63 (MQ=255) gcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcca < 1:33115901‑M2/67‑9 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTTGAAAACGAaagcggcat < 1:28081075‑M2/67‑10 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:27103042/1‑68 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:37818861/1‑68 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:31459566/1‑68 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:948983/67‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcact > 1:24533481‑M2/1‑54 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:38526079/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:17039519/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:16781885/1‑68 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:3820333/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:14179368/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:5677858/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:37557074/68‑1 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:14481398/1‑66 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:35008544/68‑1 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:10675632/68‑1 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:22966415/68‑1 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:12723838/68‑1 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTg > 1:15548300/1‑68 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAACTAGAAAACGAAAGCGCCATCAATGTGCTg > 1:8467067/1‑68 (MQ=255) gggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTga < 1:1804715/68‑1 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaa < 1:17865194‑M2/68‑22 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:7218762/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:43517791/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:3107054/1‑68 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga > 1:36433794/1‑68 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:19187368/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:16426351/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:27452568/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:23636904/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:12018744/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:29249888/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:21783297/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:21140648/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:32435870/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:13651969/67‑1 (MQ=255) gATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAAc > 1:10334423/1‑68 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacc > 1:39180236‑M2/1‑42 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcac > 1:39530735‑M2/1‑42 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACaa < 1:13895437/68‑1 (MQ=255) tAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccg > 1:24998807‑M2/1‑40 (MQ=255) tAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccg > 1:10013137‑M2/1‑40 (MQ=255) tAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccg > 1:17387795‑M2/1‑40 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:78369/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:2690018/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:22092761/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:41758381/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg < 1:9113280/68‑1 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:10927964/1‑67 (MQ=255) aGTGAATGGCGCTTCGTTTTCAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:4749407/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:40075796/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:19546505/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGcc < 1:29921953/68‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa < 1:38793184/68‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa > 1:42017419/1‑68 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccgagagaactg > 1:19939635‑M2/1‑30 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGAt > 1:40975621/1‑67 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGAt > 1:37192320/1‑67 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGAt < 1:43029044/67‑1 (MQ=255) ggCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:25629687/1‑67 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:36140420/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:24228158/1‑66 (MQ=255) cgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:15884498/1‑65 (MQ=255) gcTTCGTTTAGAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:27851487/1‑68 (MQ=255) gcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:6571215/1‑68 (MQ=255) cTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:35751674/68‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:4478359/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:8746184/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:28530788/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:35451559/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:11426651/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:31867776/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:20877289/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:21522884/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:25959452/67‑1 (MQ=255) ttCGTTTACAAAGCAGAAAACGAAAGCGCCATCAATGCGCTGAGAACAAGATTGCCTGATGCGCCgg < 1:20642014/67‑1 (MQ=255) cGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGca < 1:22530400/68‑1 (MQ=255) cGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGca < 1:26334044/68‑1 (MQ=255) gTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTTAGAACAAGATTGCCTGATGCGCTGGGca > 1:42401433/1‑67 (MQ=255) gTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaa < 1:20166073/68‑1 (MQ=255) gTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaa < 1:9695177/68‑1 (MQ=255) ttACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaac < 1:5142385/67‑1 (MQ=255) aCAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaa > 1:30280923/1‑68 (MQ=255) cAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaa > 1:25283857/1‑67 (MQ=255) aGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCt < 1:40517651/68‑1 (MQ=255) aGAAACCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGt < 1:18702248/67‑1 (MQ=255) aGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGtt < 1:41455659/68‑1 (MQ=255) aaaCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGaa > 1:36706843/1‑68 (MQ=255) aaaCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGaa < 1:14882518/68‑1 (MQ=255) aCGAaagcgccattcactatttaaatcacccgagagaactgctgcatccgcgctttctggcgcagata < 1:33488336‑M2/68‑65 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:30764583/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:18266639/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:13059688/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:12359886/1‑68 (MQ=255) | GCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTAT > CP009273/4046748‑4046882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |