| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4170893 = | 370 (0.700) | 18 (0.040) | 9/90 | NT | 5.0% | intergenic (+40/‑280) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit |
| ? | CP009273 | 4170919 = | 384 (0.910) | intergenic (+66/‑254) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit | |||||
Only 100 of 204 total aligned reads displayed.
ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4170970‑4170893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcaccagccTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > CP009273/4170919‑4170985 ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAA > 1:22132682/1‑68ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAA > 1:25481563/1‑68ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAA > 1:5078938/1‑68 GCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTC > 1:39870309/1‑68 GCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTC > 1:15665098/1‑68 CAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTC > 1:10168303/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCt > 1:27928714/1‑66 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:12098546/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:12176170/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:7589779/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:11896792/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:37942533/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:30551577/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:29499706/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:11774429/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:8402764/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCA > 1:19374284/1‑67 AGTAGTCAAACAGTCTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGT < 1:3084223/65‑1 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCA > 1:2027370/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCA > 1:377356/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCA > 1:41340724/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACGAAAGAGTCACCA > 1:20737323/1‑67 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:31343100/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:28784000/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:35144110/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:37086966/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:65421/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:2693819/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:2646975/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:34536334/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:8162129/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:13327105/1‑68 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:5774926/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:30151215/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:23892388/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:5952729/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:13015854/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:13791986/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:43592183/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:15606916/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:36114905/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:17862388/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:29031326/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGC < 1:28099085/66‑1 AAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCCTT < 1:33181401/68‑1 AAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCCTT < 1:39420534/68‑1 AACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTT < 1:39107141/68‑1 ACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGT > 1:17029511/1‑56 GTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGC < 1:30426128/66‑1 GAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCT < 1:42816005/67‑1 acCGCTACTGGCGCCTTACAGCGC‑AAAAAGCCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTA < 1:34037228/66‑1 AACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTA < 1:29985535/68‑1 TACTGGCGCCTTACAGCGC‑AAAACGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCG < 1:5455660/68‑1 CTGGCGCCTTACAGCGC‑AAAAAGCCTGGCGACTAAAAAGCCACCAGCCTTTTTGCGCTGTAAGGCGCC < 1:39723240/68‑1 CTTACAGCGC‑AAAACGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGC < 1:27758458/67‑1 TTACAGCGC‑AAAACGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGT < 1:3631042/68‑1 AAAAAGCCTGGGCACAAAAAAGGCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACT < 1:40155090/67‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:15072153/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:23293235/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:38120878/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:14539354/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:7744513/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:13914946/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:32175916/68‑1 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:5595213/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:10163702/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:40858404/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:13584869/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:10639925/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:5169436/1‑67 TCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTC > 1:2499579/1‑68 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCA < 1:21439261/68‑1 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCA < 1:32482773/68‑1 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTT < 1:13384199/66‑1 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTT < 1:6952163/66‑1 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTT < 1:42075091/66‑1 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:7659147/68‑1 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT > 1:3857460/1‑68 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:6350837/68‑1 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT > 1:802835/1‑68 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:32578679/68‑1 CAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACTCTGTTTGACTACTGCTGTGCCTTTCAATG < 1:41047283/68‑1 GCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCT > 1:3191325/1‑68 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:35504736/1‑68 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:423031/1‑68 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:33802794/1‑68 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:9221020/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:42515064/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:27178624/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:25117978/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:22727813/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:21742247/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:18878865/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:17573768/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT < 1:14781010/67‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:39318178/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:38597820/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:28351034/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:19619107/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:18460007/65‑1 ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGC‑AAAAAGGCTGGTGACTAAAAAGTCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4170970‑4170893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcaccagccTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > CP009273/4170919‑4170985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |