| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1023817 = | NA (NA) | 7 (0.020) | 5/84 | NT | NA | intergenic (+2/+43) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein |
| ? | CP009273 | 1023851 = | NA (NA) | intergenic (+36/+9) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein | |||||
Only 100 of 155 total aligned reads displayed.
CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAGGGGTTTTGCCT > 1:33168808/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:26460126/1‑68 GCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTT < 1:18755351/68‑1 CAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTT > 1:40817604/1‑67 AACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCG > 1:31880649/1‑68 AACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCG > 1:31929299/1‑68 AACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCG > 1:1608954/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:29001159/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:761266/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:24047582/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:13515491/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:6625388/1‑68 ACAACTCCAGGCCCCGCGTATGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:32184537/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCGTTCAGGG > 1:39854438/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG > 1:37772866/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG < 1:35516210/68‑1 CAACCCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG < 1:8490331/68‑1 AACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGG < 1:36338132/68‑1 ACTCCAGGCCCCGGGTCTGCGTTACTAATCCCTGAACAAATCCCCGCAAGGTTTTTGCCTTCCGGGGA < 1:40734111/68‑1 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA < 1:16050847/68‑1 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA > 1:23434219/1‑68 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA < 1:32856687/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAACTCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:39138421/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:40640393/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT > 1:35110332/1‑68 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:18162985/68‑1 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT < 1:14941039/68‑1 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT > 1:27253452/1‑68 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAAACCCCGGAAGGTTTTTGCCTTCCGGGGATT > 1:3267833/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:38005114/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT < 1:30714853/68‑1 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT < 1:12677043/68‑1 CGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGG < 1:14144657/68‑1 CGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGG < 1:14094889/68‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTA < 1:20427986/67‑1 GTAACAAATCCCTCAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTAGTTAC < 1:11791742/68‑1 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCT > 1:27693858/1‑67 CTTCCGGGGATTTGTTCAGGGTTTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:18448717/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:22088792/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:2130078/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:25278869/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:5085300/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:32300847/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:16987616/68‑1 TTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCG < 1:41471378/68‑1 TTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCG < 1:5876073/68‑1 TCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCG > 1:16247602/1‑67 CCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCC > 1:20657369/1‑68 CCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCC > 1:37646546/1‑68 CGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA < 1:28011146/68‑1 CGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA < 1:27917851/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:40304504/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:1089025/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:30955804/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:276619/1‑67 GGGGATTTGTTCAGGGAGTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:40016777/68‑1 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:10163674/67‑1 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:38260185/67‑1 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:21014854/67‑1 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:42539673/67‑1 GATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCT < 1:36977387/67‑1 TTTGTTCAGGTATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:17192233/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:12360462/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:13038966/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:14840957/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:4932707/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:6892111/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:14936866/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:41191629/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:16373677/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:327299/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:7135488/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:11763054/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:38085394/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA > 1:17530776/1‑67 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:23583009/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:23210349/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:3558393/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:22981215/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:33920111/67‑1 TTTGTTCAGGGATTAGGTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:17175162/67‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:30132690/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:37797380/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:28751553/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:24707380/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:33090081/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:5609021/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:5177842/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:33825906/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:42699740/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:3477001/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:22124654/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:16262314/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:16382043/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:36505487/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:39406022/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:17311501/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:37739097/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:19838857/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTCGCGGATGGTCTGCGCCAGCTCATC < 1:20440990/68‑1 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |