BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1433166 =	249 (0.470)	16 (0.040)	9/96	NT	5.6%	coding (1876/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase
*	?	CP009273	1433229 =	327 (0.720)	16 (0.040)	9/96	NT	5.6%	coding (1813/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase

Only 100 of 148 total aligned reads displayed.

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:4605736/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:26703464/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:39619853/1‑68

 CTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACA                                                                          <  1:1279181/68‑1

 CTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACA                                                                          >  1:39517627/1‑68

  TGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACA                                                                          >  1:8841150/1‑67

  TGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACA                                                                          >  1:7056921/1‑67

  TGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACA                                                                          >  1:13792693/1‑67

   GGCAGGCTCTGGCGGTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:36329960/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:40590421/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:3174382/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:17385879/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:39604232/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:22150563/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:34793466/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:3387942/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:33398506/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:15697374/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:1261678/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:41775037/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:14213941/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:41145896/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:14956210/68‑1

   GGCAGGCGCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:21648374/68‑1

    GCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        >  1:1694274/1‑67

    GCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        >  1:19124847/1‑67

     CAGGCTCTGGCGCTGGCGCGTGTATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:12583583/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:43646036/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:33660593/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:33899626/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:42342123/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:10579129/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:25296884/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:24162654/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:15811434/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:35170247/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:36083755/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:36990212/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:39229329/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:22229203/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:41267594/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:196570/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:18476260/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:41089001/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:16185486/66‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGGAAATCCGCACAGCG                                                                       >  1:10675301/1‑67

       GGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCt                                                                    >  1:11721913/1‑67

         cgCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:19545343/63‑1

         CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACGGCGCC                                                                     <  1:15931397/65‑1

         CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:30631557/65‑1

          TCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGA                                                                  <  1:36107419/67‑1

               CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:8614799/67‑1

               CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:41422628/67‑1

               CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:3777004/67‑1

                   GGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGT                                                        <  1:35868858/68‑1

                        GTGAACCCGTAGAAGAAGTGCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCG                                                    <  1:40395801/67‑1

                            agCCGTAGAAGAAGTCCCGTGGCAACCGGTAACTCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCA                                               <  1:37485528/66‑1

                            ATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCA                                               <  1:39323351/68‑1

                            ATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCC                                                <  1:12036846/67‑1

                            ATCCGTACAAGAAGGCCCGTTCCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCA                                               <  1:375842/68‑1

                                       AAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTG                                     >  1:23949494/1‑67

                                           TCCGTTCCAACCGGAAAAACCCCACCGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCT                                 <  1:27998055/67‑1

                                            CCGTTGCAACCGGAAAAGCCCCCCACCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTT                               <  1:25790237/68‑1

                                                 GCAACGGGTAAAACCGCACAGCGCCAGAGCCGGCCTGTTGCGTTCCACCAGATCCTGGCCTTTGCTAC                          <  1:36290025/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:14611240/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:30336897/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:7308542/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:36653680/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:27919911/1‑67

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:41872411/1‑67

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     <  1:32660388/67‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAAC                    <  1:6130745/52‑1

                                                                         CAGAGCCTGCCATTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:22293480/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:13773992/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:12181733/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:11168738/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:4358355/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:5022007/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:14004115/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:6350029/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:28882524/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:15083818/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:4053133/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:31527111/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:31839824/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:32997407/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:2732475/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:27170822/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:26736577/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:35862487/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:22576404/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:22541365/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:2240231/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:37299546/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:21634044/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:40729759/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:42771896/1‑65

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTACTACTGTAACTTTTGGCAATCGCACCCT  <  1:18242355/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACAAGATCCTGGCCTTTGCTACTGTAACTTTTGGCATTCGCACGCT  <  1:286561/68‑1

                                                                         CAGAGCATGCCAGTTGCGTTCCACCCGATCCTGGCCTTTGCTACTGGAACTTTTGGCAATCGCACCCT  <  1:10697169/68‑1

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.