| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 249 (0.470) | 16 (0.040) | 9/96 | NT | 5.6% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 327 (0.720) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 354 total aligned reads displayed.
CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 | cGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:34693647/1‑68 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:26736577‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:27170822‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:40729759‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:17419964‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:13773992‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:15569068‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:37299546‑M1/2‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:37527982‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:14210497‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:27919911‑M1/64‑67 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:41872411‑M1/64‑67 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:32660388‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:33024980‑M1/64‑67 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:7609827/67‑1 (MQ=255) tgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:29711407‑M1/4‑1 (MQ=255) cATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc > 1:29087356/1‑66 (MQ=255) cGCAGCGGTTACGGTTTTCACGAACTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:9249036/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:31779212/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:6948176/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:39608253/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:12560112/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:24215548/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:5047025/68‑1 (MQ=255) cGCAGCGGTTACGGTTTCCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:21228371/68‑1 (MQ=255) cGCAGCGGTTACGGATTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:10453515/68‑1 (MQ=255) aGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCg > 1:2244638/1‑68 (MQ=255) aGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCg > 1:2088034/1‑68 (MQ=255) gCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCgg > 1:38773981/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:42101977/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:28450019/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt < 1:38662139/68‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:38439835/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt < 1:26175005/68‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGAGGTCGATTGGCGCTGTGCGGAt > 1:19584202/1‑68 (MQ=255) tACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:41643420/1‑67 (MQ=255) gttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:6130745‑M1/4‑1 (MQ=255) cGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTAcc > 1:20348891/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:25830259/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:30762430/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:18080715/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:25188492/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:13939710/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:32266282/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:31468805/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:21518001/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:35237364/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:21708177/1‑68 (MQ=255) tttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGtt < 1:26370826/68‑1 (MQ=255) tttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGtt < 1:4473771/68‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:37165595/68‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:6707635/68‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:36665675/68‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:7195868/68‑1 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc > 1:33565164/1‑68 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:5616932/68‑1 (MQ=255) aGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct > 1:30385840/1‑67 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct < 1:17122375/67‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:19163511/65‑1 (MQ=255) ggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTa < 1:10867877/68‑1 (MQ=255) tCGGAAACCACTGGCGGTCGATTGGCGCGGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGa < 1:42532197/68‑1 (MQ=255) ggaacgcaactggcaggctcTGGCGCGGTGCGGATTTACCGGTTGCAACGGAAATTCTTCTACGGAt < 1:35872055‑M1/47‑1 (MQ=255) ggAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGAtt < 1:25708842/68‑1 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:4929397/1‑67 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:24780223/1‑67 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:29976369/1‑67 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:5687787/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:32979204/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:38105788/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:402832/1‑68 (MQ=255) cACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:9550349/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccag < 1:39761838/68‑1 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:15071477/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:35840894/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:8753978/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:41465545/1‑67 (MQ=255) ctgTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:36363349/65‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:31879683/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:13066259/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:22753316/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:11640052/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:23937276/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:41126719/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:11280984/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:40407553/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:29259440/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:2687453/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:28635595/67‑1 (MQ=255) gggcGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:16588661/64‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:34182101/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:11979842/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:27910563/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:13584870/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:22269643/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:2310607/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:39939224/67‑1 (MQ=255) gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:43101068/68‑1 (MQ=255) gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:7919634/68‑1 (MQ=255) tcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:36107419‑M1/65‑1 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag > 1:38278456/1‑67 (MQ=255) | CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |