| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 383 (0.730) | 26 (0.060) | 15/92 | NT | 5.9% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 515 (1.190) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 203 total aligned reads displayed.
TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:19605416/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:35012917/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:34270461/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:3312314/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:18699758/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:16544824/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:16318268/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:37945013/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:32678243/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:1540800/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:32071372/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:3085574/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:29408200/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:11483108/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:22865587/1‑68 GCTCGGGGAAGTGATGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:42777212/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:36878650/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:30949172/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:32728749/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:25241748/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:24060181/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:3603788/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:36575793/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:9785326/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:37691702/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:39069654/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:39660435/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:40961717/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:41767037/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:4405768/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:5153010/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:5454166/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:5622750/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:5903487/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:22353328/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:1593343/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:16737250/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:17063486/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:17346509/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:17959995/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:18999588/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:11762992/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:12998037/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGATGTAAAACCAGAGACGCA > 1:7821462/1‑68 GCTCGGGGAAGTGAAGTTTAAG‑AAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:947774/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:23629574/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:39211838/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:42361902/66‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:1997541/66‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:9005850/66‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:15110281/68‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:21090621/68‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:33437871/68‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:42028452/68‑1 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:20555290/1‑67 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:41801381/1‑67 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:17182303/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:41563445/67‑1 GAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGG < 1:13990668/68‑1 GAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGG > 1:18563407/1‑68 TTTAAGAACGCCGAGAAAGAACTCCCGGTAACGTTGTAAAACCAGAGACGGATCCGGCGACAGGATCC < 1:13552284/68‑1 AAAGGCGCGAAAGAACACCCGGTAACGTTGTAAAACCAGAGGCGCATCCGGCGACAGGAGCCAAATG > 1:10559514/1‑67 AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGCTGCGTg > 1:28255481/1‑67 AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTC < 1:20202320/68‑1 AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCG > 1:36923388/1‑66 ACACCCGGTAACGTTGTAAAACCAGAGACGCCTCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTG < 1:10790311/68‑1 ACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTG > 1:32817845/1‑68 ACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAAC > 1:11970055/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGCCAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:15752015/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:20782042/1‑68 TTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTT > 1:14860728/1‑68 TGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTT > 1:19871349/1‑67 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:40522772/1‑68 GACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:21824325/1‑68 GACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:38750257/1‑68 GACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:18863404/1‑68 ACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:26017596/1‑67 ACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:5810878/1‑67 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:41256037/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:40079431/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:37453803/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:901197/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:4946591/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:8046139/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:30090702/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:29227238/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGGTTTACAACGTTACCGGGTGTTCTT < 1:16618928/66‑1 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG > 1:41353916/1‑67 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG > 1:27958126/1‑67 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:6333211/68‑1 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:26516881/68‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:6977519/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:7557677/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:30221954/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:30533190/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:3072875/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:2552683/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:9571603/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:9630905/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:10282147/1‑66 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |