| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 383 (0.730) | 26 (0.060) | 15/92 | NT | 5.9% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 515 (1.190) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 630 total aligned reads displayed.
GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 | gtgaagtTTAAGTAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAttt > 1:39594229/1‑68 (MQ=255) gaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTgg > 1:2572629/1‑68 (MQ=255) gaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTgg > 1:21178761/1‑68 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGt > 1:34225421/1‑67 (MQ=255) aaaGGCGCGAAAGAACACCCGGTAACGTTGTAAAACCAGAGGCGCATCCGGCgacaggagccaaatg > 1:10559514‑M1/1‑52 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:38200040‑M2/67‑2 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:34569475‑M2/1‑65 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg < 1:14058303‑M2/68‑6 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg < 1:38901660‑M2/68‑6 (MQ=255) cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgga > 1:41353916‑M2/1‑61 (MQ=255) aaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:22141948‑M2/67‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:949377‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:30090702‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:32865223‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:41607208‑M2/1‑56 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:29032244/1‑68 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCTGAATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:8534078/1‑67 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:3368288/1‑67 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:710502/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:12941544/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:1241200/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:29228468/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:613259/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:19025297/68‑1 (MQ=255) ccGGTAACGGTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:16096026/68‑1 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg > 1:22581660/1‑66 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc < 1:31712667/68‑1 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc < 1:26735068/68‑1 (MQ=255) ggTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCt < 1:14796407/68‑1 (MQ=255) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttaca > 1:19871349‑M2/1‑43 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCgacagggaccacatgccggatgcgtctctggttttacaac > 1:10917176‑M1/1‑28 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaac > 1:11970055‑M1/1‑28 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaac > 1:20782042‑M2/1‑42 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:33394014/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:3225908/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:37927133/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:41917563/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:10392424/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGGCgccggatgcgtctctggttttacaac > 1:15752015‑M2/1‑42 (MQ=255) gTTGTAAAACCCGACCCCCATCCGGCATTTGGTCCCTGTCgccggatgcgtctctggttttacaacgt > 1:25467466‑M2/1‑40 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:27988316/68‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:35084681/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:23611488/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:643758/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:21826007/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:40437610/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:40973964/67‑1 (MQ=255) aaaaCCAGAGACGCATCCAGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:20037226/67‑1 (MQ=255) aaaCCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgg > 1:23986669‑M1/1‑20 (MQ=255) aCCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggt > 1:30573180‑M1/1‑18 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:11529999/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:14971418/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:5670096/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGCCCTACaa > 1:900891/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:10021362/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:2851042/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:9363603/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:24412156/1‑68 (MQ=255) ccAGAGACGCATCCGGCATCTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:1861754/68‑1 (MQ=255) cAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgt > 1:16635464‑M1/1‑16 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:32057991/1‑67 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCAGTCGCCGGATGCGGCTTGAACGACTTATCCGGCCTAaaaat > 1:30254910/1‑67 (MQ=18) agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCa > 1:27490219/1‑68 (MQ=255) gaCGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:18863404‑M1/1‑12 (MQ=255) gaCGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:38750257‑M1/1‑12 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:4836856/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:5361646/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:2334931/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc < 1:5070505/65‑1 (MQ=255) ccGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:15381824/2‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:37479944/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:26271565/1‑67 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:8046139‑M1/66‑57 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:40079431‑M1/1‑10 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:41256037‑M1/66‑57 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:36923388‑M2/1‑24 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:20202790/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc < 1:36414451/68‑1 (MQ=255) cGCAGCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:20435707/1‑68 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:21678768/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:1653223/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:36053121/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa > 1:42761280/1‑68 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:16997114/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa > 1:1452449/1‑68 (MQ=255) tCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcg > 1:13558790‑M1/1‑6 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:25011648/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:43336598/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:35678375/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:19457497/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:31258526/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGGCTACAATACCTTACAAATctg < 1:29670478/68‑3 (MQ=18) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:42008398/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg > 1:17303894/1‑68 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:32800958/68‑1 (MQ=255) gCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:18018437‑M1/1‑2 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:4640771‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:7557677‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:3072875‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:9630905‑M1/1‑1 (MQ=255) | GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |