| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 383 (0.730) | 26 (0.060) | 15/92 | NT | 5.9% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 515 (1.190) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 669 total aligned reads displayed.
GAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATT > CP009273/2229946‑2230078 | aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:2552683‑M2/67‑2 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgcc > 1:14878578‑M2/1‑65 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:19439203‑M2/1‑65 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:29819251‑M2/1‑65 (MQ=255) cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgga > 1:27958126‑M2/1‑61 (MQ=255) aaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:22141948‑M2/67‑11 (MQ=255) aaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:32715203‑M2/67‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTTGTTCCTGTCGCCGGATGCgg < 1:20243712/67‑1 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgt > 1:26017596‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:32865223‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:28770118‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:40079431‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:41256037‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:901197‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg < 1:30745234/67‑1 (MQ=255) aagaaCACCCGGTAACCTTGTAACACCACAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg < 1:37710162/67‑1 (MQ=37) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:15755121/1‑68 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:41512438/1‑67 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:2355846/1‑67 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:7557983/1‑67 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggt > 1:29385152‑M2/1‑50 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:2427605/1‑68 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:30226963/1‑67 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:21627642/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:8753988/68‑1 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg > 1:22581660/1‑66 (MQ=255) cGGTAACGTTGTAAAACAAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc < 1:42106504/68‑1 (MQ=255) cGGTAACGTTGT‑AAACCAGATACGCCTCCGGCATTTGGTTACTGTAGCCGGATGCGGCTTGAAAGCCt > 1:2914850/1‑68 (MQ=21) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttaca > 1:19871349‑M2/1‑43 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:17336739/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:31630826/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:3888472/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:41917563/1‑67 (MQ=255) cGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATcc > 1:9604950/1‑68 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCg > 1:2312658/1‑68 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCg > 1:7811139/1‑68 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg < 1:5698167/67‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg < 1:14405620/67‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:6955576/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:4481718/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGc < 1:36542798/68‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:21826007/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:9477960/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:643758/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:11655573/67‑1 (MQ=255) aaaaCCAGAGACGCATCCAGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:20037226/67‑1 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:10972541/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCAGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:3456703/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:10021362/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:40515725/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:39818606/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:34104725/1‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:18820413/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:477164/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:5361646/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc < 1:1043054/65‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:24940041/1‑68 (MQ=255) ccGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCATTATCCGGCCTACAAAACCAt > 1:21074520/2‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:7295472/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:26271565/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:33524338/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:33303083/1‑67 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCTGATGAGGATTGAAGGCCTTATCCGGCCTACAAAACCAt < 1:13521278/66‑1 (MQ=17) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:23709208/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:12438383/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:20612899/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:35540918/1‑68 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:14549633/1‑68 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc < 1:8454328/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:1653223/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:5128236/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:31946977/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa > 1:36032922/1‑68 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:18157225/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:31258526/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:43336598/68‑1 (MQ=255) cATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa > 1:25190608/1‑68 (MQ=255) cATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa > 1:32225021/1‑68 (MQ=255) aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa < 1:17009485/67‑1 (MQ=255) aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTAt < 1:40850460/68‑1 (MQ=255) aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTAt < 1:10636192/68‑1 (MQ=255) ttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGt < 1:28352120/68‑1 (MQ=255) ttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGt < 1:37996884/68‑1 (MQ=255) ttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGt < 1:34983285/68‑1 (MQ=255) gTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGa > 1:27325664/1‑68 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGa > 1:15397413/1‑66 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAg < 1:16839563/67‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:12065401/68‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:26831507/68‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:5955326/68‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:37297381/68‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:16125942/68‑1 (MQ=255) tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGc < 1:30549241/68‑1 (MQ=255) ccTGTCgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctttcttaaacttc < 1:13990668‑M2/68‑63 (MQ=255) gTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAt < 1:4287237/68‑1 (MQ=255) gTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAt < 1:1516696/68‑1 (MQ=255) gTCGCAGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAt < 1:38336959/68‑1 (MQ=255) tCgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctttcttaaacttcact < 1:18989‑M2/67‑66 (MQ=255) cGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAtt < 1:36849512/67‑1 (MQ=255) cGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAtt < 1:12896433/67‑1 (MQ=255) | GAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATT > CP009273/2229946‑2230078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |