| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4506708 = | 432 (0.820) | 18 (0.040) | 8/94 | NT | 5.1% | coding (827/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | CP009273 | 4506742 = | 302 (0.680) | coding (793/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
Only 100 of 553 total aligned reads displayed.
TGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506642‑4506774 | cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc < 1:14585541‑M1/2‑1 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:8397710/1‑67 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:43344655/1‑67 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:42978923/1‑67 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:23319339‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:11769764‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:26283870‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:31449258‑M1/6‑1 (MQ=255) acatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcgg > 1:19491693‑M1/61‑67 (MQ=255) tAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcg < 1:8695956/68‑1 (MQ=255) catcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcggc > 1:17415719‑M1/60‑67 (MQ=255) aCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCggg < 1:10246761/68‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGaac > 1:8979087/1‑65 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:14391709/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:35703174/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:26976666/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:11547941/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:20148498/1‑67 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:15911226/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:37404735/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:32315922/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:37692564/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:5513229/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:28577998/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:15593841/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:10665361/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:1762217/1‑67 (MQ=255) tCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgc > 1:3330552/1‑68 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:4784188/68‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCACCGGCGGGATCgcagcgcagc > 1:33755715/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:16728599/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:35377500/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:31833743/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:18657062/67‑1 (MQ=255) accgctgggtgaggtgatagccacgctaacccgttaccGCAACGGCGGGATCGCCGCGCCGCccgccg < 1:182083‑M1/30‑1 (MQ=255) accgctgggtgaggtgatagccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCGGGACGCCg < 1:7010387‑M1/30‑1 (MQ=255) aTTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCCGCGCAGCACGCCGt > 1:23963984/1‑68 (MQ=255) aTTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGt > 1:41365496/1‑68 (MQ=255) tttttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGtt < 1:32810502/68‑1 (MQ=255) tttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGc < 1:7772947/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGTCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:10054476/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:22129340/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:34149836/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:38534163/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:24461930/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:5920277/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:23063752/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:6704283/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCGCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:21095996/68‑1 (MQ=255) cAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGt < 1:20282432/68‑1 (MQ=255) aGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTa > 1:42028246/1‑68 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:38101291/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:42475936/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:11310071/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:34983950/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:19000433/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:28076822/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:23633305/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:26088871/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:17171848/67‑1 (MQ=255) tgatagccacgctaacccgttaccGCAACGGCGGGGTCGCAGCGCAGCCCGCCGGTGCGGTAACGGGt < 1:29312643‑M1/44‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:16334893/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:13153445/67‑1 (MQ=255) aCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGtt > 1:20786414/1‑68 (MQ=255) gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg < 1:6178453/68‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:33234489/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:25742828/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:406701/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:39679716/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:36867344/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg > 1:39353017/1‑68 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg > 1:41933459/1‑68 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:29035292/68‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:4104922/68‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:3443967/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:24733506/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:2756142/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:36260579/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:9295389/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:30178273/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt < 1:25518814/68‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:36655625/1‑68 (MQ=255) gctaacccgttaccGCAACGGCGGGGTCGCAGCGCAGCCCGCCGGTGCGGTTACGGGTTAGCGTGGCt < 1:21314707‑M1/54‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:26636760/67‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:12297626/1‑67 (MQ=255) cccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:20581720‑M1/58‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:42580281/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:12680857/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:13821269/1‑66 (MQ=255) ccgttaccGCACCGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTatcc < 1:40483639‑M1/58‑2 (MQ=255) ccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:1794492‑M1/58‑1 (MQ=255) taccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca < 1:42312453‑M1/63‑1 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:9818027/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:25124023/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:1410701/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:30618681/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCCTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:1538073/1‑67 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:7577842/67‑1 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:10947600/67‑1 (MQ=255) ccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCAccc < 1:21870427‑M1/66‑1 (MQ=255) | TGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506642‑4506774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |