New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4506708 =432 (0.820)18 (0.040) 8/94 NT 5.1% coding (827/954 nt) fecR FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator
?CP009273 4506742 = 302 (0.680)coding (793/954 nt) fecR FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator

Only 100 of 563 total aligned reads displayed.

TTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCGT  >  CP009273/4506675‑4506808
                                                                   |                                                                  
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   <  1:18066104/68‑1 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   >  1:29169715/1‑68 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   >  1:38534163/1‑68 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   <  1:2775328/68‑1 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   <  1:34149836/68‑1 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   <  1:12683885/68‑1 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   >  1:17799852/1‑68 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   >  1:26028448/1‑68 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   <  1:22129340/68‑1 (MQ=255)
 tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg                                                                   >  1:23063752/1‑68 (MQ=255)
  cAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGt                                                                  <  1:17184095/68‑1 (MQ=255)
   aGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTa                                                                 >  1:42028246/1‑68 (MQ=255)
      gggAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACg                                                              >  1:41925249/1‑68 (MQ=255)
        gAACGTCCCGCTCAGGCGCAGCCCTGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg                                                             <  1:18991767/67‑1 (MQ=255)
        gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg                                                             <  1:23633305/67‑1 (MQ=255)
        gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg                                                             <  1:20857014/67‑1 (MQ=255)
         ggatagccacgctaacccgttaccgcaacggcgtgctgcgctgcgatcccgccggtgcGGTAACgg                                                             <  1:40483639‑M2/8‑1 (MQ=255)
         aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg                                                            <  1:34679486/67‑1 (MQ=255)
         aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg                                                            <  1:13153445/67‑1 (MQ=255)
         aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGt                                                           >  1:20163872/1‑68 (MQ=255)
            gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg                                                        <  1:15421578/68‑1 (MQ=255)
            gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg                                                        <  1:6178453/68‑1 (MQ=255)
              gccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCCCGCCGTTGCGGTAACGGGTTAGCg                                                      <  1:32534834‑M1/49‑1 (MQ=255)
              gccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg                                                      <  1:10464878‑M1/49‑1 (MQ=255)
              gccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTGGCGGTAACGGGTTAGCg                                                      <  1:33343901‑M1/49‑1 (MQ=255)
              cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc                                                       <  1:11221765/67‑1 (MQ=255)
              cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc                                                       <  1:39679716/67‑1 (MQ=255)
                 gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg                                                   <  1:16291224/68‑1 (MQ=255)
                 gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg                                                   <  1:22748896/68‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc                                                  <  1:4861873/67‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc                                                  <  1:33206936/67‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc                                                  <  1:2756142/67‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc                                                  <  1:24733506/67‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc                                                  <  1:9295389/67‑1 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt                                                 >  1:7311041/1‑68 (MQ=255)
                   tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt                                                 >  1:31684918/1‑68 (MQ=255)
                        cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca                                             <  1:28811217/67‑1 (MQ=255)
                        cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca                                             >  1:12297626/1‑67 (MQ=255)
                        cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtc                                              <  1:9457996/66‑1 (MQ=255)
                         gcATCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac                                            <  1:25389191/67‑1 (MQ=255)
                         gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac                                            <  1:42263035/67‑1 (MQ=255)
                             cccGGCAACGGCGGGATCGCAGCGCGGCCCGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca                                        >  1:5908386/1‑67 (MQ=255)
                              ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac                                       <  1:25679915/67‑1 (MQ=255)
                               ccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCAccc                                     <  1:21870427‑M1/66‑1 (MQ=255)
                                   AACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCg                                 <  1:1413973‑M1/68‑1 (MQ=255)
                                   AACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCg                                 <  1:13438731‑M1/68‑1 (MQ=255)
                                   AACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCg                                 <  1:16676076‑M1/68‑1 (MQ=255)
                                   AACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCg                                 <  1:20505336‑M1/68‑1 (MQ=255)
                                    ACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCgg                                <  1:30560547‑M1/68‑1 (MQ=255)
                                    ACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCgg                                <  1:29813409‑M1/68‑1 (MQ=255)
                                     CGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGt                               >  1:15169544‑M1/1‑68 (MQ=255)
                                      GGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGtt                              <  1:3373572‑M1/68‑1 (MQ=255)
                                         GGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTa                            <  1:24252903‑M1/67‑1 (MQ=255)
                                            aTCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATc                          >  1:32969159/1‑66 (MQ=255)
                                                  tgcgatcccgccgttgcGGTAACGGGTTAGCGTGGCAATCACCTCACCCAGCGGTTTATCGCTGAAg                   <  1:40775676‑M2/50‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAg                   <  1:26944163/65‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAg                   <  1:34412001/65‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAg                   <  1:36147833/65‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAg                   <  1:35744141/65‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:35319105/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:10198008/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:3904154/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:26463806/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:42384815/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:8488219/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGc                  <  1:1478336/66‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCt                 <  1:10000245/67‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCt                 <  1:24982359/67‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCt                 <  1:38064141/67‑1 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:24484855/1‑68 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:453037/1‑68 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:37074635/1‑68 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:11808235/1‑68 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:11569839/1‑68 (MQ=255)
                                                    gcagcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTc                >  1:39458004/1‑68 (MQ=255)
                                                      agcaCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCa               <  1:28274799/67‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAgg             <  1:29346100/66‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAgg             <  1:17486163/66‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAg              <  1:31175868/65‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAg              <  1:8156676/65‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAg              <  1:21382660/65‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAg              <  1:37517011/65‑1 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGAt           >  1:9834725/1‑68 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGAt           >  1:18266132/1‑68 (MQ=255)
                                                         aCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGAt           >  1:42893319/1‑68 (MQ=255)
                                                           gccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATg          >  1:555422‑M2/9‑67 (MQ=255)
                                                           cccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGt         <  1:41162482‑M2/60‑1 (MQ=255)
                                                            ccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGt         >  1:19491693‑M2/8‑67 (MQ=255)
                                                            ccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGt         >  1:10925106‑M2/8‑67 (MQ=255)
                                                             cgttgcGGTAACGGGTTAGGGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTcc       <  1:6966714‑M2/62‑1 (MQ=255)
                                                             cgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTcc       <  1:2063379‑M2/62‑1 (MQ=255)
                                                             cgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTcc       <  1:23319339‑M2/62‑1 (MQ=255)
                                                             cgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTcc       <  1:1386561‑M2/62‑1 (MQ=255)
                                                             cgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTc        <  1:19964228‑M2/61‑1 (MQ=255)
                                                                tgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCtt     <  1:15986434‑M2/64‑1 (MQ=255)
                                                                tgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTc    <  1:42532780‑M2/65‑1 (MQ=255)
                                                                   ggTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGGTCAGGATGTCCTTCGt  >  1:21234844/1‑67 (MQ=255)
                                                                   ggTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCGt  >  1:6678880/1‑67 (MQ=255)
                                                                   ggTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCGt  >  1:7645899/1‑67 (MQ=255)
                                                                   ggTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCGt  >  1:36482997/1‑67 (MQ=255)
                                                                   |                                                                  
TTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCGT  >  CP009273/4506675‑4506808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.