| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1238033 = | 628 (1.190) | 38 (0.110) | 17/76 | NT | 9.7% | coding (504/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | CP009273 | 1238051 = | 280 (0.780) | coding (486/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
Only 100 of 840 total aligned reads displayed.
TTGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA > CP009273/1237966‑1238100 | ttGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCg < 1:33514411/68‑1 (MQ=255)ttGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCg < 1:27943729/68‑1 (MQ=255) tttaccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaagg > 1:41274141‑M1/67‑68 (MQ=255) tttaccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaagg > 1:36009889‑M1/67‑68 (MQ=255) tGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCgg < 1:14083003/68‑1 (MQ=255) tGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCg > 1:31162556/1‑67 (MQ=255) ggCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGc < 1:40270169/68‑1 (MQ=255) ggCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGc < 1:25240688/68‑1 (MQ=255) gCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGc > 1:26897925/1‑67 (MQ=255) ccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCg > 1:37128930‑M1/63‑68 (MQ=255) cgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCg < 1:23120341‑M1/6‑1 (MQ=255) aCGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCCCAACGTGCCTTCGGCCCGCCAt > 1:37551175/1‑68 (MQ=255) aCGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACAt < 1:19152674/68‑1 (MQ=255) cGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATg < 1:491177/68‑1 (MQ=255) cGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGCGCCTTCGGCCCGACATg < 1:39738364/68‑1 (MQ=255) ggTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATg > 1:33856182/1‑67 (MQ=255) ggTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATg > 1:10825773/1‑67 (MQ=255) ggTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGt < 1:21398914/68‑1 (MQ=255) accatttctggctggcgttacgcaattaaaccttcacctttgaatggcaaggggaaGGCCCGACAt > 1:20832711‑M1/57‑66 (MQ=255) gtACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCgg < 1:26204193/68‑1 (MQ=255) tttctggctggcgttacgcaatgaaagcttcaccattgaatggcaaggggaaGGCCCGACATGTCggg > 1:12078366‑M1/53‑68 (MQ=255) tttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCggg > 1:36401794‑M1/53‑68 (MQ=255) tACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTggg > 1:21045785/1‑67 (MQ=255) ttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGc > 1:22265180‑M1/52‑68 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:19527630/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:20225171/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:40779957/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:32030456/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:31805296/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:23851788/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:42319573/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:13577425/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:41978584/1‑67 (MQ=255) ccGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGcc > 1:19820500/1‑68 (MQ=255) ccGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:35876849/1‑66 (MQ=255) ccGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:10043571/1‑66 (MQ=255) gctCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGCCt > 1:10448679/3‑67 (MQ=255) gATCGGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:9364447/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:15933609/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:32233496/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:22559740/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:16917587/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:7101492/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:24170275/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:30356711/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:29594960/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:37947876/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:28990/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:1628904/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:27484482/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:41525149/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:1542123/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:25647017/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGGCGGGCCt > 1:38725787/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACAAGTCGGGCCt > 1:1381524/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGCCTTc > 1:28344670/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:30921143/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:39928709/1‑67 (MQ=255) gAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGCCTTCCCCtt > 1:28683014/1‑67 (MQ=255) gAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCtt < 1:12482311/67‑1 (MQ=255) tacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGcc > 1:888587‑M1/39‑67 (MQ=255) aTCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCa > 1:43575950/1‑68 (MQ=255) tCAGCATCGCATGATTGCCTCACCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:4507326/68‑1 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:7405802/68‑1 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:34595294/68‑1 (MQ=255) cAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGCCTTCCCCTTGCCAt > 1:34113137/1‑67 (MQ=255) cAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt > 1:17940993/1‑67 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCa < 1:34977016/66‑1 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCa < 1:5171386/66‑1 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAAt < 1:1750192/68‑1 (MQ=255) tCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATg < 1:39187318/68‑1 (MQ=255) gCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTGGGGCCTTCCCCTTGCCATTCAATGGt > 1:6159166/1‑68 (MQ=255) aaGATTGCCTCCCCCCAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCTTTCAATGGTGa < 1:9586967/68‑1 (MQ=255) cttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAg < 1:29981374‑M1/43‑1 (MQ=255) cttcaccattgaatgccaaggggacGGCCCGACATCTCGGGCCTTCCCCTTGCCATTCAATGGTGAAg > 1:5608829‑M1/26‑68 (MQ=255) aTTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTGAATGGTGAAgg > 1:7821723/1‑68 (MQ=255) aTTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAgg > 1:31540446/1‑68 (MQ=255) ttGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGt < 1:24779011/68‑1 (MQ=255) ttGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGt > 1:6521869/1‑68 (MQ=255) ttGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGt < 1:24490076/68‑1 (MQ=255) tGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGtt > 1:14656714/1‑68 (MQ=255) accattgaatggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCGTGCCATTCCATGGTGAAGgtg < 1:15002793‑M1/46‑2 (MQ=255) ccTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTc < 1:11410174/68‑1 (MQ=255) ccccACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCAtt > 1:1725325/1‑68 (MQ=255) ccACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGc < 1:18745559/68‑1 (MQ=255) atggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt < 1:42772644‑M1/55‑1 (MQ=255) atggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt < 1:43202270‑M1/55‑1 (MQ=255) atggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt < 1:29193323‑M1/55‑1 (MQ=255) acaACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt > 1:116918/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:838326/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:27105226/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc < 1:39380630/68‑1 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:38272959/1‑68 (MQ=255) cTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagc < 1:3438139/68‑1 (MQ=255) cTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccag < 1:35476847/67‑1 (MQ=255) cTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccag < 1:21931307/67‑1 (MQ=255) tCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagcca < 1:36795927/68‑1 (MQ=255) tCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagcca < 1:32621039/68‑1 (MQ=255) gcGGCCCGACTTGGCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagcca < 1:12907839/67‑1 (MQ=255) ccGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagcca < 1:33112522/67‑1 (MQ=255) | TTGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA > CP009273/1237966‑1238100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |