| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4311466 = | 963 (1.380) | 61 (0.100) | 21/94 | NT | 7.8% | coding (48/453 nt) | phnG | ribophosphonate triphosphate synthase subunit |
| ? | CP009273 | 4311493 = | 637 (1.080) | coding (21/453 nt) | phnG | ribophosphonate triphosphate synthase subunit | |||||
Only 100 of 301 total aligned reads displayed.
CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4311541‑4311466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcgGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG > CP009273/4311493‑4311559 CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCG > 1:1766612/1‑68 ATGATTGAATTCACTATGGAGCACTGAATGCACGCTGATACCGCGACCCGCCAGCACTGGTTGTCCGT < 1:48399577/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:46584369/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:2033278/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:2191410/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:28423572/68‑1 ATGATTGAAATCACTATGGAGCAGTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:19179613/68‑1 GATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT > 1:36675020/1‑66 ATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:55719954/68‑1 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:13989772/1‑68 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:30040856/67‑1 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:14941054/67‑1 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:53832006/67‑1 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:26210626/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:25849085/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:25531184/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:3171839/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:3885427/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:19658860/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:9282286/1‑67 GAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGC < 1:10427164/68‑1 GAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGC < 1:155472/68‑1 AATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:33062676/64‑1 ACTATGGAGCACTCAATGCACGCAGAAACCGCGACCCGCCAGCACTGGAAGGCCGTGCTGGCGGGTCG < 1:41810878/68‑1 TATGGAGCACTGAATGCCCCCAGATACCGCGCCCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:2413548/68‑1 TATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGGGCTGGCGGGTCGCG < 1:28929640/68‑1 TATGGAGCACTGAATGCACGCAGAAACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:37369259/68‑1 TATGGAGCACTGAATGCACGCAGAAACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:57749431/68‑1 ATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGCTGTCCGTGCTGGCGGGTCGCG < 1:35588060/67‑1 ATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGG > 1:32022400/1‑68 TGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGT < 1:39693/68‑1 TGGAGCACTGAATGCACGCAGAACCCCCGACCCGCCAGCACTGGATGACCGTGCTGGCGGGTCGCGGT < 1:43750957/68‑1 GCACTGAATGCACGCAGATACCGCGCCCCGCCAGCACTGGATGGCCGTGCTGGCGGGTCGCGGTATCT < 1:22848803/68‑1 TGCACCCAGATCCCGCCACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCAT < 1:31653179/68‑1 acATACCGCGCCCCGCCAGCACTGGATGGCCGTGCGGGCGGGTCGCGGTATCTGCGTGCATTCAGTGC < 1:11394893/66‑1 tcCCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGC < 1:57319390/63‑1 TACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGC < 1:16406321/65‑1 CCGCGACCCGCCAGCACTGGATGGCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCAT < 1:20902079/68‑1 gtgCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGA > 1:6549832/4‑68 CCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGGATCTGCGTGCATTCAGTGCTCCATAGTGCATTga > 1:6170347/1‑66 AGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAA > 1:8917286/1‑67 CTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATG < 1:14468207/68‑1 ATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCG > 1:4080427/1‑67 ATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCG > 1:17223520/1‑67 TGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGG < 1:42661835/67‑1 CGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGC > 1:47556192/1‑68 CGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAATGAATTCAATCATGTCGGCGCGC > 1:44311283/1‑68 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:49385337/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:41208871/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:43448105/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:43562878/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:37593262/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:2118992/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:52174600/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:12212104/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:51415258/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:11777548/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:2935580/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTAGGCGCGCG > 1:53387288/1‑67 GCTGGCGGGTCGCGGTATCTGCTTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:27060148/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGaa > 1:40007587/1‑66 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:18544214/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:5464236/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:3857979/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:24442905/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:24810293/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:32325901/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:15185341/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:15257670/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:12418628/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:12702174/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:53213059/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:5063457/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:3045921/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCATC > 1:54380779/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGC < 1:13075489/65‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGCCGCGCGTC > 1:30313538/1‑68 GCTGGCGGGTCGCGGTATCAGCGTCCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:55168419/1‑68 CTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCA > 1:45525737/1‑68 TGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:6677346/1‑68 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:3449487/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:7615782/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:23566653/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:16020365/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:43315274/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:34956994/1‑67 CGGGTCGCGGTATCTGCGTGCATTCGGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:19489297/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:55296537/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:5611833/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:57008190/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:50393960/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:50168047/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:46735496/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:8028608/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:10129821/1‑65 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG < 1:11102563/68‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG < 1:13465487/68‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCT < 1:49146667/67‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCT < 1:39136879/67‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCT < 1:36380123/67‑1 CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4311541‑4311466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcgGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG > CP009273/4311493‑4311559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |