| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4382210 | 239 (0.340) | 18 (0.030) | 13/96 | NT | 7.2% | noncoding (34/76 nt) | glyV | tRNA‑Gly |
| ? | CP009273 | = 4382323 | 257 (0.430) | noncoding (35/76 nt) | glyX | tRNA‑Gly | |||||
Only 100 of 146 total aligned reads displayed.
GCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4382137‑4382210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccttgGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAA < CP009273/4382323‑4382257 GCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACG > 1:36680158/1‑68GCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACG > 1:10877130/1‑68GCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACG > 1:25152153/1‑68 AGAATTGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:47673726/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:6835827/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:41060972/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:30698463/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:2753916/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:31548034/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:31575298/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:33265142/67‑1 AGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA < 1:11815058/67‑1 GAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA > 1:55287794/1‑66 GAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA > 1:22070015/1‑66 GAAATGCGAAAATTACGAAAACAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGA > 1:14168593/1‑66 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCTGGAATAGCTCAGTTGGTAGAGCACGACCTT < 1:9530763/68‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:56573299/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:47190052/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:29292774/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT < 1:46243249/68‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:26369904/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT < 1:24412905/68‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:42841321/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:49387449/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT < 1:40979715/68‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTT > 1:13643939/1‑68 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCT < 1:1308650/67‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:42539406/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:41344164/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:29853060/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:35177320/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:41017233/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:31935928/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:29101401/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:46733249/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:23507738/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:53338144/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:55204113/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:55954232/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:16725785/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:10192530/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:9173290/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:15139968/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:15049600/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:7952353/65‑1 AATGCGAAAATTACGAAAGCAAAATTAAGTAGAACGCGGGAATAGCTCAGTTGGTAGAGCACGAC < 1:5701754/65‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:7066198/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:38282475/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:43108961/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:56593469/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:34895857/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:10074159/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:29607241/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:2857814/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:29674109/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:16439539/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:30157924/68‑1 ATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG < 1:21308054/68‑1 TGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG > 1:12323673/1‑67 AATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGT < 1:29528554/68‑1 CGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGC < 1:16454995/68‑1 AATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAAC < 1:40828363/68‑1 GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGGTATTCCC > 1:20824060/1‑67 GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCC > 1:54428121/1‑67 CGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGg > 1:13871079/1‑67 GGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCT > 1:9185321/1‑68 GGGAATAGCTCAGTTGGTACAGCACGACCTTGGCAAGGTCGTGCTCTACAAACTGAGCTATTCCCG < 1:57288019/66‑1 GCTCAGTTGGTAGAGCACGACCTTGGCCAGGTCGTGCTCTACCAACTGAGCTATTCCCGGTTGGGTGG > 1:21367283/1‑68 CTCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGG > 1:48393176/1‑67 TCAGTTGGTAGAGCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGG > 1:12228321/1‑66 TGGTAGAGCACGACCTTGGCAAGGTCGTGCTGTACCAACTGAGCTATTGCCGCTTAGGTGGTCTGTG > 1:50094793/1‑67 GCACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCA > 1:1501994/1‑67 ACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTCTTTGCAGCA > 1:5384190/1‑68 ACGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGC > 1:52570624/1‑67 GACCTTGGCAAGGTCGTGCTCTCCCAACTGAGCTATTCCCTCATGGGTGGTCTGTGCTTTGCAGCACT < 1:53633875/68‑1 GACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACT < 1:36232406/68‑1 GACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACT < 1:32171472/68‑1 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCGCGCTTGGGTGGTCTGTGCTTGGGGGCACTTT > 1:11312326/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:28743707/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT < 1:9647410/68‑1 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:8864320/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT < 1:33593926/68‑1 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:57668956/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:1833195/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:41208994/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT < 1:41675373/68‑1 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:50819765/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:3502330/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:24283391/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:41969012/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTT < 1:48346976/67‑1 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGGAGCACTTT > 1:38048662/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGGGGTCTGTGGTTTGCAGCACTTT > 1:30727418/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:39051289/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCTTTGCAGCACTTT > 1:22173006/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTATGTGCTGTGAAGCAATTT > 1:19511339/1‑68 CCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTC > 1:29011593/1‑36 CTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTT < 1:2785863/68‑1 TGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCA > 1:30448803/1‑68 GGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAA < 1:39699933/68‑1 GCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4382137‑4382210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccttgGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAA < CP009273/4382323‑4382257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |