| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 630 (0.900) | 60 (0.100) | 16/98 | NT | 9.3% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 624 (1.020) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 144 total aligned reads displayed.
GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCT > 1:12409827/1‑68GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:28039249/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:35391849/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:5433806/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:11467713/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:36001129/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:24680747/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCCGC < 1:27573828/67‑1 GGTGGCGAATGCTCGCGCTAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTG < 1:57227290/67‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:41232295/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:30912582/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:550538/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:30982532/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:3173640/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:36480303/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:55703877/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:47868421/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:58048469/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTG > 1:2231061/1‑67 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTG > 1:7271634/1‑67 GTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGC > 1:10916342/1‑68 GTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGC > 1:11267549/1‑68 CGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGg > 1:40624690/1‑67 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGT > 1:4785022/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGGATATTCGCCAGCAGTTTGAAGAAGTAAA > 1:50720876/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAta > 1:18995505/1‑66 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:23188813/1‑68 GCTCTGTAAACGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGATTGATGAGGTAAA > 1:54681780/1‑68 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGGATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:34063580/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCGTATTAGCCCGCCGATTGAAGAAGTACAT > 1:29474386/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTGGGCAGCAGATTGAAGAAGTAAAT > 1:48388684/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCGGCAGATTGAAGAAGTAAAT > 1:45552450/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGATTGAAGAAGTAAAT > 1:31866020/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCGGCAGATTGAAGAAGTAAAT > 1:26682191/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCTGATTGATGAAGTAAATg > 1:28250469/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTTAAT > 1:20292206/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:32767201/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:2738741/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:21540912/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:19413511/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:43203298/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCAGATTAGCCCGCAGATTGCAGAAGTAAAT > 1:41978773/1‑67 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:52262556/1‑68 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:56701802/1‑68 CGAGTATTTACTTCTTCAATCTGCTGGTGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:28786911/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGGTT > 1:18614015/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:50976502/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:42028980/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:10373901/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:9045494/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:8218012/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:39764703/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:38534781/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:36692163/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:55127093/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:20802509/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:54614470/1‑67 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCGAGCAGATTGAAGAAGTTAATACTCGCTTACA > 1:35920736/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTTCA > 1:53073069/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:57832242/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGAGTGAAGAAGTAAATACTCGCTTACA > 1:5948648/1‑68 TTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGC > 1:10447592/1‑67 ACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACA > 1:10824299/1‑68 CTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCAC > 1:13495494/1‑66 CTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAA > 1:2630355/1‑68 CTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAA > 1:40899792/1‑68 TCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATG > 1:48813763/1‑68 TCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGC > 1:44463228/1‑67 TGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:49578025/1‑68 GCTGGCGCATATTCGCCAGTAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:23886369/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGCGCACAATGGCGCTTCGC > 1:14564676/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:11794359/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:47325681/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:15887976/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:3788693/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:7958927/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:45521695/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:44540684/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:11158715/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:41866288/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:26879585/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:1674692/67‑1 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACATTGGCGCTTCGCGCGAGC > 1:15808107/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:12586401/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:5721606/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:27764331/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:9210613/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:9339000/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:17190811/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:32875929/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:36376649/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:40294179/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:44048127/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:42783628/1‑68 CGCAGATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:36342936/1‑68 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:32895247/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:46873265/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:41123475/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:42173542/67‑1 GCATATTCGCCAGCAGATTGAAGAAGAAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:25080495/67‑1 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |